DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp6 and alpi.2

DIOPT Version :9

Sequence 1:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001116946.1 Gene:alpi.2 / 100144722 XenbaseID:XB-GENE-854953 Length:532 Species:Xenopus tropicalis


Alignment Length:537 Identity:228/537 - (42%)
Similarity:296/537 - (55%) Gaps:81/537 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLVLAVCLSGSASGQRDHPRG----RSFDAESHPIKYAEEQQTQYWVDKAQAKLLSKLAEQESAT 68
            ||:||:.:         ||..    .|.:||.:|         ::|.|  |||...|.|...:..
 Frog    18 LLLLAITV---------HPSTGVVVSSLEAEKNP---------KFWND--QAKETLKNALNLNPI 62

  Fly    69 TNKAKNVILFLGDGMSVHTVTATR----NLLGDSAEQ--VYFEGFPYTGLSKTYCVNRQVADSAC 127
            |::|||:|:||||||.|.|:.|.|    .:.|...|:  :..|.|||..|||.|.|:.||.|||.
 Frog    63 THRAKNLIMFLGDGMGVTTIAAARIYQGQVEGQPGEENIMAMEKFPYVALSKVYNVDAQVPDSAG 127

  Fly   128 TATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGKDAGLVTTARVTHASPA 192
            |.||||.|||||.||:||:|.....:|  .:::.:.|.||.|.|:.|||..|:|||.||.||||.
 Frog   128 TGTAYLCGVKANSGTLGVSAAAIYGNC--VSSKGNEVTSILHRAKLAGKSVGIVTTTRVQHASPG 190

  Fly   193 GVYAHIADRNWENDWEVA----NRECDPEQTIDIARQLVEQPVGQQLKVILGGGRKNFIDATVND 253
            ..|||.|.|||.:|.|:.    |..|.     |||.|||.   ...:.|||||||.....|...|
 Frog   191 AAYAHSASRNWYSDNEMTSAMINNGCK-----DIAYQLVH---NTDIDVILGGGRAYMYPAGTPD 247

  Fly   254 EEGYPGK------RTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTDYLLGLFANDHLP 312
            .| |||.      |.||.:|...||.:::    :|:|||:::..:.|:::.||||:|||....:.
 Frog   248 PE-YPGSSADRGLRRDGLNLTDIWLSKRQ----NARYVWNKEQFNAVNVDTTDYLMGLFEPKDMK 307

  Fly   313 YNGDRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLFVEGARIDMAHHDTFAKRSLEDTAEFAR 377
            |    :..|:...||||:|:||.||.:||:|.|||||||||.|||..|||..||:||.:..||.:
 Frog   308 Y----ELNRNASLDPSLAEMTEKAIRILSKNPKGFFLFVEGGRIDHGHHDGNAKQSLTEALEFDK 368

  Fly   378 AVQKARELTSEDDTLIVVTADHAHVMSINGYPYRDQEITGLA-QLADDNLPYTILSYANGPGY-- 439
            ||.:..:||.|::||.||||||:||.:..||..|...|.||| .||.|..|||.|.|.|||||  
 Frog   369 AVLRGGQLTQENETLTVVTADHSHVFTFGGYTDRGNSIFGLAPSLASDRKPYTSLLYGNGPGYPL 433

  Fly   440 -------YSGYNRAEGRALLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYASGPYAQYFSGNYE 497
                   .:|.|            ...:.|......|:.:|||||:|||:.|.||.|..|.|.:|
 Frog   434 PDAIRANITGVN------------TGSNSYLQQAAVPVVSETHGGEDVAIMAKGPQAHLFHGFHE 486

  Fly   498 QSNIPALMARAAGIGPY 514
            ||.|..:||.||.:.||
 Frog   487 QSYIAHVMAYAACLEPY 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp6NP_610496.1 ALP_like 72..511 CDD:304875 208/464 (45%)
alpi.2NP_001116946.1 Alk_phosphatase 66..500 CDD:333956 208/464 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 372 1.000 Domainoid score I883
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 382 1.000 Inparanoid score I2005
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm9329
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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