DRSC/TRiP Functional Genomics Resources

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Protein Alignment brp and erc1b

DIOPT Version :9

Sequence 1:NP_001246228.1 Gene:brp / 35977 FlyBaseID:FBgn0259246 Length:2238 Species:Drosophila melanogaster
Sequence 2:XP_021330884.1 Gene:erc1b / 560003 ZFINID:ZDB-GENE-041210-51 Length:1136 Species:Danio rerio


Alignment Length:1627 Identity:335/1627 - (20%)
Similarity:604/1627 - (37%) Gaps:608/1627 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TSSGVRSPGRVRRLQELPTVDRSPSRDYG------APRGSPLAM-------------GSPYYRDM 55
            ||...:||||..||...|.:....:...|      .|.|..|:|             |..|..|.
Zfish    16 TSGSTQSPGRSPRLPRSPRLGHRRTNSTGGSGAGAGPGGKTLSMENIQSLNAAYATSGPMYMSDN 80

  Fly    56 DEPTS------------------PAGA-----GHHRSRSASRPPMAHAMDY-----PRTRYQSLD 92
            :..||                  |.|.     |...:.:...|....|:.:     |.|...:: 
Zfish    81 EVVTSGPDLPKSTMTLGRTGGRVPYGVRTTVMGSSPNIATGSPGTTDAIAFGDHHMPSTLASTV- 144

  Fly    93 RGGLVDPHDREFIPIREPRDRSRDRSLERGLYLEDELYGRSARQSPSAMGGYNTGMGPTSDRAYL 157
                  ||.     :|:.||                                ||.|         
Zfish   145 ------PHS-----LRQARD--------------------------------NTIM--------- 157

  Fly   158 GDLQHQNTDLQRELGNLKRELELTNQKLGSSMHSIKTFWSPELKKERALRKEESAKYSLINDQLK 222
             |||.|..::.||...|::|:::...||.|||:||||||||||||||||||:|::|.|:..:|.:
Zfish   158 -DLQTQLKEVLRENELLRKEVDVKESKLSSSMNSIKTFWSPELKKERALRKDEASKISVWKEQYR 221

  Fly   223 LLSTENQKQAMLVRQLEEELRLRMRQPNLEMQQ-----------------QMEAIYAENDHLQRE 270
            ::..|||...|.::.|::|||:: |..|...||                 ..:.::.|::...:|
Zfish   222 VVQDENQHLQMTIQALQDELRIQ-RDLNQLFQQDPSSRPGEPLTAELTEENFQRLHGEHERQAKE 285

  Fly   271 ISILRETIKDLECRVETQKQTLIARDESIKKLLEMLQAKGMGKEEERQMFQQMQAMAQKQMYNNY 335
            :.:||:|::::|.|::||||||.||||||||||||||:||:..:...:..::.:.:|..:|:.::
Zfish   286 LFLLRKTLEEMELRIDTQKQTLNARDESIKKLLEMLQSKGLSAKASEEDHERTRRLADAEMHIHH 350

  Fly   336 TGASGSSPPLPDIIGQYYGPGSLGPGPLSYGSGNGYGPPGYDLYGPSTSTAAGGYGLYDPQIYGP 400
                                                                             
Zfish   351 ----------------------------------------------------------------- 350

  Fly   401 CQQTSPIRRRRYSIAGLPSATMYNDVYGYPAPPLQQTSSSNIVNLLNEAHKSISRSSQILNLTNQ 465
                                                     :.:||::..|.             
Zfish   351 -----------------------------------------LESLLDQRDKE------------- 361

  Fly   466 ARQLGQLVTTPLGGGGVGMGLGRVVSSYPTLHPGDTSPPYLNDNLMQMSTSFSSQPNMYFQPQAQ 530
                              |||                   |.::|.:....         .|::.
Zfish   362 ------------------MGL-------------------LREDLHRRYEG---------APESA 380

  Fly   531 VQQVLPTQLTAAQSAAAAAAR-LRPAYSVTNLVSSYPTTTAAGYGCKYGGYGNPYQSDLGYGNPL 594
            ..:.|.|.:....|...:..| ||.......::.|                          ...|
Zfish   381 KTKALQTVIEMKDSKIGSMERSLRDLEDEIQMLKS--------------------------NGAL 419

  Fly   595 APFQQRQLMAHQSLHASNPAISQYYQNQGAATGTGASAAALAYNLQQQFAGTQHYGGGSQGPPLG 659
            :..::.:.|....::.|:   |::.:|:             ...|:.:.|.:|     :||..| 
Zfish   420 STEEREEEMKQMEVYRSH---SKFMKNK-------------VEQLKDELAQSQ-----TQGEEL- 462

  Fly   660 HSHIQASVQQQMHPQYQYHVHQHQNHLQTHPLAALANTSGPFGGTLASSARDYVDGLHHAAHSHT 724
                                                                             
Zfish   463 ----------------------------------------------------------------- 462

  Fly   725 HPHSHPHHSSHHSHHTAYPHSHSHHQQQQPHQAHHHHHLPYSKLDLDYPKLPQEHKRQLDEFRLE 789
                                                            .|...|.::::|:.:.:
Zfish   463 ------------------------------------------------KKRVSELQQEIDQVKQD 479

  Fly   790 IQRRDQEILAMAAKMKTLEEQHQDYQRHIAVLKESLCAKEEHYNMLQTDVEEMRARLEEKNRLIE 854
            :.|:|.|:|.:..|::||..|..|.::|:.||||||.|||:...:|||:|:.:|.|||||...:.
Zfish   480 LSRKDSELLGLQTKLETLTNQFSDSKQHVDVLKESLTAKEQRAAILQTEVDALRLRLEEKEATLN 544

  Fly   855 KKTQGTLQTVQERNRLTSELTELKDHMDIKDRKISVLQRKIENLEDLLKEKDNQVDMARARLSAM 919
            ||::...:..:|:..|..|:.:|||.:|:|:||::|||:|||||::.||:|:.|:...:.|:.::
Zfish   545 KKSKQIQEVSEEKGTLNGEIHDLKDMLDVKERKVNVLQKKIENLQEQLKDKEKQMSSLKERVKSL 609

  Fly   920 QAHHSSSEGALTSLEEAIGDKEKQMAQLRDQRDRAEHEKQEERDLHEREVADYKIKLRAAESEVE 984
            ||..|:::.||::||||:.:||:.:.:|::||||.|.||.||.:.:::|:.:.|.|:...:.:  
Zfish   610 QADTSNTDTALSTLEEALAEKERIIERLKEQRDRDEREKSEELESNKKELKELKEKVNVLQGD-- 672

  Fly   985 KLQTRLERAVTERERLEIKLEASQSELGKSKAELEKATCEMGRSSADWESTKQRIARLELENERL 1049
                     :::||...:.|:...|.|..|..:.:                 .::..||:..|:.
Zfish   673 ---------LSDREASLLDLKEHASSLASSGLKKD-----------------SKLKSLEIALEQK 711

  Fly  1050 KHDLERSQNVQKLMFETGKISTTFGRTTMTTSQELDRAQERADKASAELRRTQAELRVTQSDAER 1114
            |.:..:.::                           :.::|:|..|..           .|:|..
Zfish   712 KEECIKLES---------------------------QLKKRSDLVSGH-----------PSNAHS 738

  Fly  1115 AREEA---AALQEKLEKSQGEVYRLKAKLENAQGEQESLRQELEKAQSGVSRIHADRDRAFSEVE 1176
            ...||   |.|.|::...:.||.|.|.....||.|.:.|.:.|.:.::..:    |:||..:|:|
Zfish   739 VAVEAQTSAGLSERIATLEQEVARYKEDAGKAQAEVDRLLEILREMENEKN----DKDRKINELE 799

  Fly  1177 -----KIKEEMERTQATLGKSQLQHEKLQNSLDKAQNEVDHLQDKLDKACTENRRLVLEKEKLTY 1236
                 ::|::.::......|.|::..|....:::|:...|::.:...:.          |:.|..
Zfish   800 SMTSRQMKDQSKKVANLKHKEQVEKNKNAQLMEEARKREDNINESSQQV----------KDSLRL 854

  Fly  1237 DYDNLQSQLDKALGQAARMQKERETLSLDTDRIREKLEKTQVQLGRIQKERDQFSDELETLKERS 1301
            ..|.:: :|::||.::.::..|||.:....:..|...||   |:..:....::...|||::|.:.
Zfish   855 KDDRIE-ELEEALRESVQITAEREMVLAQEESARANAEK---QMEELLAAMEKVKQELESMKAKL 915

  Fly  1302 ESAQTLLMKAARDREAMQTDLEVLKERYEKSHAIQQKLQMERDDAVTEVEILKEKLDKALYASQK 1366
            .|.|    ::..::|:..|.|     |.|:...:::.|:|:::               ||.|:  
Zfish   916 SSTQ----QSLAEKESHLTTL-----RAERRKHLEEVLEMKQE---------------ALLAA-- 954

  Fly  1367 LIDEKDTSNKEFEKMLEKYDRAQNEIYRLQSRCDTAEADRARLEVEAE---RSGLAASKAREDLR 1428
             |.|||.:....|....|..:.|:|:..|:     .|.||...:::.:   |..|.|....:|..
Zfish   955 -ISEKDANIALLELSSSKKKKTQDEVALLK-----REKDRLVHQLKQQTQNRMKLMADNYEDDHH 1013

  Fly  1429 KLQD-ESTRLQEACDRAALQLSRAKECEDNARSELE----------HSRD-----------RFDK 1471
            |..: :.|..:.:.|:....|.   :...| ||:|:          |.||           .:.:
Zfish  1014 KASNSDQTNHKPSPDQIIPPLI---DLNQN-RSKLKLYIGHLTALCHERDPLILQDLAPPSAYHR 1074

  Fly  1472 LQTDIRRAQGEK---EHFQSELERVTYELERAHAAQTKASASVEAAKEEAAHYAVELEKMRDRYE 1533
            .|.|....:.:|   |..:||||    :.||..|...:.:.||  .::.|.|....||::.:..|
Zfish  1075 SQRDAWEEELQKMSPEQLESELE----QCERESAELQEYANSV--LQQIADHCPDILEQVVNALE 1133

  Fly  1534 KS 1535
            :|
Zfish  1134 ES 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brpNP_001246228.1 KRTAP 332..401 CDD:256601 0/68 (0%)
Myosin_tail_1 789..1824 CDD:279860 193/783 (25%)
SMC_prok_B 1509..>2215 CDD:274008 8/27 (30%)
Bud13 2091..>2157 CDD:286779
erc1bXP_021330884.1 Cast 160..1003 CDD:313412 266/1285 (21%)
SMC_N 851..>1108 CDD:330553 66/300 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4809
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 362 1.000 Inparanoid score I2153
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002038
OrthoInspector 1 1.000 - - oto39217
orthoMCL 1 0.900 - - OOG6_104556
Panther 1 1.100 - - O PTHR18861
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3525
SonicParanoid 1 1.000 - - X1708
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.890

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