Sequence 1: | NP_001246228.1 | Gene: | brp / 35977 | FlyBaseID: | FBgn0259246 | Length: | 2238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017446344.1 | Gene: | Ccdc39 / 310315 | RGDID: | 1306277 | Length: | 934 | Species: | Rattus norvegicus |
Alignment Length: | 1145 | Identity: | 235/1145 - (20%) |
---|---|---|---|
Similarity: | 430/1145 - (37%) | Gaps: | 322/1145 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 937 IGDKEKQMAQLRDQRDRAEHEKQEERDLHEREVADYKIKLRAAESEVEKLQTRLERAVTERERLE 1001
Fly 1002 IKLEASQSELGKSKAELEKATCEMGRSSADWESTKQRIARLELENERLKHDLERSQNVQKLMFE- 1065
Fly 1066 TGKISTTFGRTTMTTSQELDRA--QERADKASAELRRTQAELRVTQSDAERAREEAAALQEKLEK 1128
Fly 1129 SQGEVYRLKAKLENAQGEQESLRQELEKAQSGVSRIHADRDRAFSEVEKIKEEMERTQATLGKSQ 1193
Fly 1194 LQHEKLQNSLDKAQNEVDHLQ---DKLDKACTENRRLVLEKEKLTYDYDNLQSQLDKALGQAARM 1255
Fly 1256 QKERETLSLDTDRIREKLEKTQVQLGRIQKERDQFSDELETLKERSESAQTLLMKAARDREAMQT 1320
Fly 1321 DLEVLKERYEKSHAIQQKLQMERDDAVTEVEILKEKLDKALYASQKLIDEKDTSNKE----FEKM 1381
Fly 1382 LEKYDRAQNEIYRLQSRCDTAEADRARLEVEAERS---GLAASKAREDLRKLQDESTRLQEACDR 1443
Fly 1444 AALQLSRAKECEDNARSELEHSRDRFDKLQTDIRRAQGEKEHFQSELERVTYELERAHAAQTKAS 1508
Fly 1509 ASVEAAKEEAAHYAVELEKMRDRYEKSQVELRKLQDTDTFGRETRRLKEENERLREKLDKTLMEL 1573
Fly 1574 ETIRGKSQYESESFEKYKDKYEKIEMEVQNMESKLHETSLQLELSKGEVAKMLANQEKQRSELER 1638
Fly 1639 AHIEREKARDKHEKLLKEVDRLRLQQSSVSPGDPVRASTSSSSALSAGERQEIDRLRDRLEKALQ 1703
Fly 1704 SRDATELEAGRLAKELEKAQMHLAKQQENTESTRIEFERMGAELGRLHDRLE------------- 1755
Fly 1756 ---------KAEAEREALRQANRSGGAGAAPHPQLEKHVQKLESDVKQLAMEREQLVLQLEK--- 1808
Fly 1809 -SQEILMNFQKELQNAEAELQKTREENRKLRNGHQVPPVAAPPAGPSPAEFQAMQKEIQTLQQKL 1872
Fly 1873 QESERALQAAGPQQAQAAAAAGASREEIE-------QWRKVIEQEKSRADMADKAAQEMHKRIQL 1930
Fly 1931 M----DQHIKDQHAQMQKMQQQMQQQQQAAQQAVQQAAQQQQSAAGAGGADPKELEKVRGELQAA 1991
Fly 1992 CTERDRFQQQ-LELLVTELEKSKMSNQEQAKQLQTAQQQV 2030 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brp | NP_001246228.1 | KRTAP | 332..401 | CDD:256601 | |
Myosin_tail_1 | 789..1824 | CDD:279860 | 199/925 (22%) | ||
SMC_prok_B | 1509..>2215 | CDD:274008 | 105/560 (19%) | ||
Bud13 | 2091..>2157 | CDD:286779 | |||
Ccdc39 | XP_017446344.1 | Smc | 22..695 | CDD:224117 | 191/882 (22%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |