DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brp and Erc2

DIOPT Version :9

Sequence 1:NP_001246228.1 Gene:brp / 35977 FlyBaseID:FBgn0259246 Length:2238 Species:Drosophila melanogaster
Sequence 2:XP_006518993.1 Gene:Erc2 / 238988 MGIID:1098749 Length:1069 Species:Mus musculus


Alignment Length:1443 Identity:307/1443 - (21%)
Similarity:516/1443 - (35%) Gaps:598/1443 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SPGRVRRLQELPTV-DRSPSRDYGAPRGSPLAM-------------GSPYYRDMD---EPTSPAG 63
            ||.|..||...|.: .|..|...|...|..|:|             |..|..|.:   ..|.|.|
Mouse    14 SPSRSPRLPRSPRLGHRRTSSGGGGGTGKTLSMENIQSLNAAYATSGPMYLSDHEGVASTTYPKG 78

  Fly    64 A---GHHRSRS---------ASRPPMAHA-MDYPRTRYQSLDRGGL--VDPHDREFIP--IREPR 111
            .   |...:|:         .|.|.:|.| :.:......:...|||  ...|....:|  :|:.|
Mouse    79 TMTLGRATNRAVYGGRVTAMGSSPNIASAGLSHTDVLSYTDQHGGLSGSSHHHHHQVPSMLRQVR 143

  Fly   112 DRSRDRSLERGLYLEDELYGRSARQSPSAMGGYNTGMGPTSDRAYLGDLQHQNTDLQRELGNLKR 176
            |.:                                          :.|||.|..:||||...|::
Mouse   144 DST------------------------------------------MLDLQAQLKELQRENDLLRK 166

  Fly   177 ELELTNQKLGSSMHSIKTFWSPELKKERALRKEESAKYSLINDQLKLLSTENQ-------KQAML 234
            ||::.:.||||||:||||||||||||||.|||||:|:.|::.:|:::...|||       |...|
Mouse   167 ELDIKDSKLGSSMNSIKTFWSPELKKERVLRKEEAARMSVLKEQMRVSHEENQLLDARRTKHLQL 231

  Fly   235 -VRQLEEELRLRMRQPNLEMQQQ-----------------MEAIYAENDHLQREISILRETIKDL 281
             ::.|::|||.: |..|..:||:                 ...:.||:|...:|:.:||:|::::
Mouse   232 TIQALQDELRTQ-RDLNHLLQQESGNRGAEHFTIELTEENFRRLQAEHDRQAKELFLLRKTLEEM 295

  Fly   282 ECRVETQKQTLIARDESIKKLLEMLQAKGMGKEEERQMFQQMQAMAQKQMYNNYTGASGSSPPLP 346
            |.|:|||||||.||||||||||||||:||:                                   
Mouse   296 ELRIETQKQTLNARDESIKKLLEMLQSKGL----------------------------------- 325

  Fly   347 DIIGQYYGPGSLGPGPLSYGSGNGYGPPGYDLYGPSTSTAAGGYGLYDPQIYGPCQQTSPIRRRR 411
                                              ||.|.                 :....|.||
Mouse   326 ----------------------------------PSKSL-----------------EDDNERTRR 339

  Fly   412 YSIAGLPSATMYNDVYGYPAPPLQQTSSSNIVNLLNEAHKSISRSSQILNLTNQARQLGQLVTTP 476
              :|...|...:.:|.      |.|....|| :|..|.|    |.||:                 
Mouse   340 --MAEAESQVSHLEVI------LDQKEKENI-HLREELH----RRSQL----------------- 374

  Fly   477 LGGGGVGMGLGRVVSSYPTLHPGDTSPPYLNDNLMQMSTSFSSQPNMYFQPQAQVQQVLPTQLTA 541
                                                             ||:....:.|.|.:..
Mouse   375 -------------------------------------------------QPEPAKTKALQTVIEM 390

  Fly   542 AQSAAAAAARLRPAYSVTNLVSSYPTTTAAGYGCKYGGYGNPYQSDLGYGNPLAPFQQRQLMAHQ 606
            ..:..|:..|                                                       
Mouse   391 KDTKIASLER------------------------------------------------------- 400

  Fly   607 SLHASNPAISQYYQNQGAATGTGASAAALAYNLQQQFAGTQHYGGGSQGPPLGHSHIQASVQQQM 671
                                           |::.                     ::..||.  
Mouse   401 -------------------------------NIRD---------------------LEDEVQM-- 411

  Fly   672 HPQYQYHVHQHQNHLQTHPLAALANTSGPFGGTLASSARDYVDGLHHAAHSHTHPHSHPHHSSHH 736
                               |.|        .|.|.:..|:                         
Mouse   412 -------------------LKA--------NGVLNTEDRE------------------------- 424

  Fly   737 SHHTAYPHSHSHHQQQQPHQAHHHHHLPYSKLDLDYPKLPQEHKRQLDEFRLEIQRRDQEILAMA 801
                      ...:|.:.:::|       ||.          .|.::|:.:.|:.:::.|:||:.
Mouse   425 ----------EEIKQIEVYKSH-------SKF----------MKTKIDQLKQELSKKESELLALQ 462

  Fly   802 AKMKTLEEQHQDYQRHIAVLKESLCAKEEHYNMLQTDVEEMRARLEEKNRLIEKKTQGTLQTVQE 866
            .|::||..|:.|.::||.||||||.|||:...:|||:|:.:|.|||||...:.|||:......:|
Mouse   463 TKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEE 527

  Fly   867 RNRLTSELTELKDHMDIKDRKISVLQRKIENLEDLLKEKDNQVDMARARLSAMQAHHSSSEGALT 931
            :..|..|:.::||.:::|:|||:|||:|||||::.|::||.|:...:.|:.::|...|:::.||.
Mouse   528 KGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALA 592

  Fly   932 SLEEAIGDKEKQMAQLRDQRDRAEHEKQEERDLHEREVADYKIKLRAAESEVEKLQTRLERAVTE 996
            :||||:.:||:.:.:|::||:|.:.|:.||.:...:|..|.|.|:.|.::|           :||
Mouse   593 TLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAE-----------LTE 646

  Fly   997 RERLEIKLEASQSELGKSKAELEKATCEMGRSSADWESTKQRIARLELENERLKHDLERSQNVQK 1061
            :|...|.|:...|.|         |:..:.|.|        ::..||:..|:.|           
Mouse   647 KESSLIDLKEHASSL---------ASAGLKRDS--------KLKSLEIAIEQKK----------- 683

  Fly  1062 LMFETGKISTTFGRTTMTTSQELDRAQERADKASAELRRTQAEL---------------RVTQSD 1111
                                       |..:|..|:|::...:|               |:....
Mouse   684 ---------------------------EECNKLEAQLKKQAEQLFNQMYNPAHNIEDDSRMNPEF 721

  Fly  1112 AERARE---EAAALQEKLEKSQGEVYRLKAKLENAQGEQESLRQELEKAQSGVSRIHADRDRAFS 1173
            |:|.::   ||:..:::..|:|.||.||...|:..:.|:....:::.:.:|...|...|:::..:
Mouse   722 ADRLKQLDKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELESLTLRHMKDQNKKVA 786

  Fly  1174 ------EVEKIK-----EEMERTQATL--GKSQLQHEKLQNSLDKAQNEVDHLQDKLDKACTENR 1225
                  ::||.|     ||:.|.:.::  ....||.|:|.|:|:|.:.|:|..:.:|    ...:
Mouse   787 NLKYNQQLEKKKNAQLLEEVRRREDSMVDNSQHLQIEELMNALEKTRQELDATKARL----ASTQ 847

  Fly  1226 RLVLEKEKLTYDYDNLQSQLDKALGQAARMQKERETLSLD--------TDRIREKLEKTQVQLGR 1282
            :.:.|||.   ...||:.:..|.|.:...|::|....::.        .:....|.:|||.::..
Mouse   848 QSLAEKEA---HLANLRIERRKQLEEILEMKQEALLAAISEKDANIALLELSASKKKKTQEEVMA 909

  Fly  1283 IQKERDQFSDELE---------------------------TLKERSESAQTLLMKAARDREAMQT 1320
            :::|:|:...:|:                           |.|....|....:    ..|...|.
Mouse   910 LKREKDRLVHQLKQQVYRSRKHPPCSNIPCTCDAGYSPDFTAKYHGSSYDAYM----GQRSQTQN 970

  Fly  1321 DLEVLKERYEKSH 1333
            .::::.:.|::.|
Mouse   971 RMKLMADNYDEDH 983

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brpNP_001246228.1 KRTAP 332..401 CDD:256601 3/68 (4%)
Myosin_tail_1 789..1824 CDD:279860 152/611 (25%)
SMC_prok_B 1509..>2215 CDD:274008
Bud13 2091..>2157 CDD:286779
Erc2XP_006518993.1 Cast 151..924 CDD:370855 266/1199 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4809
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 370 1.000 Inparanoid score I2114
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002038
OrthoInspector 1 1.000 - - otm43803
orthoMCL 1 0.900 - - OOG6_104556
Panther 1 1.100 - - LDO PTHR18861
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3525
SonicParanoid 1 1.000 - - X1708
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.890

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