DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brp and Erc1

DIOPT Version :10

Sequence 1:NP_001400998.1 Gene:brp / 35977 FlyBaseID:FBgn0259246 Length:2243 Species:Drosophila melanogaster
Sequence 2:NP_444434.2 Gene:Erc1 / 111173 MGIID:2151013 Length:1120 Species:Mus musculus


Alignment Length:1552 Identity:326/1552 - (21%)
Similarity:590/1552 - (38%) Gaps:549/1552 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RSPGRVRRLQELPTVDRSPSRDYGAPRGSPLAMGSPYYRDMDEPTSPAGAGHHRSRSASRPPMAH 79
            :||||..||...|.:....:...|...|:.:..||.....|:...|...|      .|:..||  
Mouse    16 QSPGRSPRLPRSPRLGHRRTNSTGGSSGNSVGGGSGKTLSMENIQSLNAA------YATSGPM-- 72

  Fly    80 AMDYPRTRYQSLDRGGLVDPHDREFIPIREPRDRSRDRSLERGLYLEDELYGRSARQSP-----S 139
                    |.|          |.|.:....|:...              ..|||..:.|     :
Mouse    73 --------YLS----------DHENVGAETPKSTM--------------TLGRSGGRLPYGVRMT 105

  Fly   140 AMGGYN--TGMGPTSDRAYLG--------------------------DLQHQNTDLQRELGNLKR 176
            |||...  ...|..||....|                          |||.|..::.||...|::
Mouse   106 AMGSSPNIASSGVASDTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKEVLRENDLLRK 170

  Fly   177 ELELTNQKLGSSMHSIKTFWSPELKKERALRKEESAKYSLINDQLKLLSTENQKQAMLVRQLEEE 241
            ::|:...||.|||:||||||||||||||||||:|::|.::..:|.:::..|||...|.::.|::|
Mouse   171 DVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDE 235

  Fly   242 LRLRMRQPNLEMQQ-----------------QMEAIYAENDHLQREISILRETIKDLECRVETQK 289
            ||:: |..|...||                 ..:.::||::...:|:.:||:|::::|.|:||||
Mouse   236 LRIQ-RDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQK 299

  Fly   290 QTLIARDESIKKLLEMLQAKGMGKEEERQMFQQMQAMAQKQMYNNYTGASGSSPPLPDIIGQYYG 354
            |||.||||||||||||||:||:..:...:..::.:.:|:.:|:.::                   
Mouse   300 QTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHH------------------- 345

  Fly   355 PGSLGPGPLSYGSGNGYGPPGYDLYGPSTSTAAGGYGLYDPQIYGPCQQTSPIRRRRYSIAGLPS 419
                                                                          |.|
Mouse   346 --------------------------------------------------------------LES 348

  Fly   420 ATMYNDVYGYPAPPLQQTSSSNIVNLLNEAHKSISRSSQILNLTNQARQLGQLVTTPLGGGGVGM 484
            .             |:|....|  |:|.|                                    
Mouse   349 L-------------LEQKEKEN--NMLRE------------------------------------ 362

  Fly   485 GLGRVVSSYPTLHPGDTSPPYLNDNLMQMSTSFSSQPNMYFQPQAQVQQVLPTQLTAAQSAAAAA 549
                                       :|...|.:.|:                          :
Mouse   363 ---------------------------EMHRRFENAPD--------------------------S 374

  Fly   550 ARLRPAYSVTNLVSSYPTTTAAGYGCKYGGYGNPYQSDLGYGNPLAPFQQRQLMAHQSLHASNPA 614
            |:.:...:|..:..|..::...|.                          |.|.....:..||.|
Mouse   375 AKTKALQTVIEMKDSKISSMERGL--------------------------RDLEEEIQMLKSNGA 413

  Fly   615 ISQYYQNQGAATGTGASAAALAYNLQQQFAGTQHYGGGSQGPPLGHSHIQASVQQQMHPQYQYHV 679
            :|.                                                  :::.....|..|
Mouse   414 LSS--------------------------------------------------EEREEEMKQMEV 428

  Fly   680 HQHQNHLQTHPLAALANTSGPFGGTLASSARDYVDGLHHAAHSHTHPHSHPHHSSHHSHHTAYPH 744
            ::                                                               
Mouse   429 YR--------------------------------------------------------------- 430

  Fly   745 SHSHHQQQQPHQAHHHHHLPYSKLDLDYPKLPQEH---KRQLDEFRLEIQRRDQEILAMAAKMKT 806
            |||...:.:..|....    .|..|....:|.:..   :.::.:.:.|:.|:|.|:||:..|::|
Mouse   431 SHSKFMKNKVEQLKEE----LSSKDAQGEELKKRAAGLQSEIGQVKQELSRKDTELLALQTKLET 491

  Fly   807 LEEQHQDYQRHIAVLKESLCAKEEHYNMLQTDVEEMRARLEEKNRLIEKKTQGTLQTVQERNRLT 871
            |..|..|.::||.||||||.|||:...:|||:|:.:|.|||||..::.|||:......:|:....
Mouse   492 LTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQA 556

  Fly   872 SELTELKDHMDIKDRKISVLQRKIENLEDLLKEKDNQVDMARARLSAMQAHHSSSEGALTSLEEA 936
            .|:.:|||.:|:|:||::|||:|||||::.|::|:.|:...:.|:.::||..::::.|||:||||
Mouse   557 GEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEA 621

  Fly   937 IGDKEKQMAQLRDQRDRAEHEKQEERDLHEREVADYKIKLRAAESEVEKLQTRLERAVTERERLE 1001
            :.|||:.:.:|::||||.|.|||||.|.:::::.|.:.|:...:.::.:.:..|         |:
Mouse   622 LADKERTIERLKEQRDRDEREKQEEIDTYKKDLKDLREKVSLLQGDLSEKEASL---------LD 677

  Fly  1002 IKLEASQSELGKSKAELEKATCEMGRSSADWESTKQRIARLELENERLKHDLERSQMQLEEQTTL 1066
            ||..||    ..:.:.|:|               ..|:..||:..|:.|.:..:.:.||      
Mouse   678 IKEHAS----SLASSGLKK---------------DSRLKTLEIALEQKKEECLKMESQL------ 717

  Fly  1067 HKTTFGRTTMTTSQELDRAQERADKASAELRRTQAELRVTQGETEKRFSDAERAREEAAALQEKL 1131
                                ::|.:|:.|.|.:.        |...|....||   |.:..:::.
Mouse   718 --------------------KKAHEATLEARASP--------EMSDRIQQLER---EISRYKDES 751

  Fly  1132 EKSQGEVYRLKAKLENAQGEQESLRQELEKAQSGVSRIHADRDRAFS------EVEKIK-----E 1185
            .|:|.||.||...|:..:.|:....:::.:.:|..||...|:::..:      :|||.|     |
Mouse   752 SKAQTEVDRLLEILKEVENEKNDKDKKIAELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLE 816

  Fly  1186 EMERTQATLGKSQLQHEKLQNSLDKAQNEVDHLQDKLDKA--CTENRRLVLEKEKLTYDYDNLQS 1248
            |..|.:.:|..|.   ::||:||.|..:.::.|::.|.::  .|..|.:||.:|:..  ..|.:.
Mouse   817 EARRREDSLSDSS---QQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESA--RTNAEK 876

  Fly  1249 QLDKALGQAARMQKERETLSLDTDRIREKLEKTQVQLGRIQKERDQFSDELETLKERS------- 1306
            |:::.|....::::|.|::.......::.|.:.:..|..::.||.:..:|:..:|:.:       
Mouse   877 QVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISE 941

  Fly  1307 ESAQTLLMKAARDREAMQTDLEVLKERYEKSHAIQQKLQMERDDAVTEVEILKEKLDKALYASQK 1371
            :.|...|::.:..::..|.::..||.  ||...:||..|..::    .::::.:..:...:.|.:
Mouse   942 KDANIALLELSSSKKKTQEEVAALKR--EKDRLVQQLKQQTQN----RMKLMADNYEDDHFRSSR 1000

  Fly  1372 --LIDEKDTSNKEFEKMLE-KYDRAQNEIY--RLQSRCD----------------TAEADRARLE 1415
              ..:.|.:.::..:.:|| ..:|::.::|  .|.:.|.                .|:.::|..|
Mouse  1001 SNQTNHKPSPDQIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILRGLTPPASYNADGEQAAWE 1065

  Fly  1416 VEAERSGLAASKAREDLRKLQDESTRLQEACDRAALQLSRAKECED------NARSE 1466
            .|.::  :...:.:.:|.|::.::..|||..:....|:  |..|.|      ||..|
Mouse  1066 NELQK--MTQEQLQNELEKVEGDNAELQEFANTILQQI--ADHCPDILEQVVNALEE 1118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brpNP_001400998.1 Cast 160..>313 CDD:431111 76/169 (45%)
Cast <780..1186 CDD:431111 122/416 (29%)
SMC_prok_B 870..1664 CDD:274008 148/644 (23%)
SMC_prok_B 1427..2214 CDD:274008 12/46 (26%)
Erc1NP_444434.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 11/37 (30%)
Cast 154..986 CDD:431111 268/1236 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 801..840 14/41 (34%)
RBD-FIP 1072..1112 CDD:462805 9/41 (22%)

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