DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brp and erc2

DIOPT Version :9

Sequence 1:NP_001246228.1 Gene:brp / 35977 FlyBaseID:FBgn0259246 Length:2238 Species:Drosophila melanogaster
Sequence 2:XP_021334189.1 Gene:erc2 / 101883379 -ID:- Length:509 Species:Danio rerio


Alignment Length:485 Identity:136/485 - (28%)
Similarity:240/485 - (49%) Gaps:91/485 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   747 SHHQQQQPHQAHHHHHLPYSKLDLDYPKLPQEHKRQLDEFRLEIQRRDQEILAMAAKMKTLEEQH 811
            ||.::.:..:.:.:|    ||.          .|.::|..:.|:.:::.|::|:..|:.||..|:
Zfish    84 SHGEEFRQMEVYKNH----SKF----------MKNKIDLLKQEVVKKESELMALQTKLDTLTNQN 134

  Fly   812 QDYQRHIAVLKESLCAKEEHYNMLQTDVEEMRARLEEKNRLIEKKTQGTLQTVQERNRLTSELTE 876
            .|.::||.||||||.|||....:|||:||.:|.|:||:...:.||.:.....::|:..|:||:.:
Zfish   135 SDSKKHIEVLKESLTAKEHRSCILQTEVEALRLRVEERESFLNKKNKQIQDLIEEKATLSSEICD 199

  Fly   877 LKDHMDIKDRKISVLQRKIENLEDLLKEKDNQVDMARARLSAMQAHHSSSEGALTSLEEAIGDKE 941
            |||.:|:|::|||:||:|:|||...|||:|.|:.....|:|::||..|:::.||.:||||:..|.
Zfish   200 LKDMLDVKEKKISILQKKLENLAQQLKERDTQLVSLELRVSSLQADSSNTDSALITLEEALSQKI 264

  Fly   942 KQMAQLRDQRDRAEHEKQEERDLHEREVADYKIKLRAAESEVEKLQTRL-ERAVTERER------ 999
            ::          ||.:|.|..:|               :|::..||.|| |:...:.:|      
Zfish   265 EE----------AEMQKNENNEL---------------KSKLASLQQRLSEKQACDSDRVSGWSP 304

  Fly  1000 -LEIKLEASQSELGKSKAELEKATCEMGRSSADWESTKQRIARL--ELENERLKHDLERSQNVQK 1061
             |..:|:..|:|....:.||:|:..|:           ||:..|  :|::|||:.|....|..::
Zfish   305 DLSERLQILQTEASGHQEELQKSHSEL-----------QRVTDLLRDLQSERLQQDNRIIQMERQ 358

  Fly  1062 LMFETGKISTT---FGRTTMTTSQELDRAQERADKASAELRRTQAELRVTQSDAERAREEAAALQ 1123
            |..::.|.|.:   .|.|:..|.::||......||...||...:..|.|:||.......|.:.::
Zfish   359 LKEQSQKQSVSPGQAGETSPNTQRQLDDLLSALDKTRKELDVVRQRLSVSQSSLSERDNELSRIR 423

  Fly  1124 EKLEKSQGEVYRLKAKLENAQGEQE--SLRQELEKAQSGVSRIHADRDRAFSEVEKIKEEMERTQ 1186
            .:..|...|:.:||    |....::  :||:|.|:..:...::|       |.::.:.|..|.  
Zfish   424 AEHSKQLSEILQLK----NMSSPEDVMTLRREKERFINHQKQVH-------SRMKPMAEHYED-- 475

  Fly  1187 ATLGKSQLQHEKLQNSLDKAQNEVDHLQDK 1216
                    :|...|.|     :...|:|::
Zfish   476 --------EHIHAQYS-----HHPQHMQER 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brpNP_001246228.1 KRTAP 332..401 CDD:256601
Myosin_tail_1 789..1824 CDD:279860 129/443 (29%)
SMC_prok_B 1509..>2215 CDD:274008
Bud13 2091..>2157 CDD:286779
erc2XP_021334189.1 SMC_N <14..467 CDD:330553 129/443 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D187649at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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