DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt2 and wnt11f2

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001138276.1 Gene:wnt11f2 / 791595 ZFINID:ZDB-GENE-990603-12 Length:353 Species:Danio rerio


Alignment Length:371 Identity:121/371 - (32%)
Similarity:185/371 - (49%) Gaps:37/371 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWKIHNKLLIYILWIMEIRLVSSFTSVML--------------CGRIPGLTPGQRNMCREMPDAL 51
            |.:..|.||::|..:..|...:..:.:.|              |..:.||.|.|:.:|:...:.:
Zfish     1 MTEYRNFLLLFITSLSVIYPCTGISWLGLTINGSSVGWNQTHHCKLLDGLVPDQQQLCKRNLELM 65

  Fly    52 IALGEGHQLGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTASREAAYTYAIASAGAAYAVTAACA 116
            .::....:|....|...|...|||||.:.....|...:...:||||:.:::|:|..::|:..|||
Zfish    66 HSIVRAARLTKSACTSSFSDMRWNCSSIESAPHFTPDLAKGTREAAFVFSLAAAVVSHAIARACA 130

  Fly   117 RGNISTCGCDVRHKATPTGGGTPDEPWKWGGCSADVDFGMRYARRFMDARELERDSR----TLMN 177
            .|::.:|.|    .|.|:....||  ::||||..::.:|::....|.||....|.|.    .||.
Zfish   131 SGDLPSCSC----AAMPSEQAAPD--FRWGGCGDNLRYGLQMGSAFSDAPIRNRRSGPQAFRLMQ 189

  Fly   178 LHNNRAGRTLVKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKA-KTVQAVKGKR 241
            ||||..||.::...|...||||||||||.:|||||.|.....:...|..||..| |.:....|.|
Zfish   190 LHNNAVGRQVLMDSLEMKCKCHGVSGSCSVKTCWKGLQDISTISADLKSKYLSATKVIPRQIGTR 254

  Fly   242 GLRLVLSRKKHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRTGHGPQS 306
              |.::.|:...      :||    ...||:||.:||:||.::.:.||.||:.|.|.:|..|.:|
Zfish   255 --RQLVPREMEV------RPV----GENELVYLVSSPDYCTQNAKQGSLGTTDRQCNKTASGSES 307

  Fly   307 CDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTCK 352
            |.|:|||||:|........:|:|::.|||.|.|..|..:.|.:.||
Zfish   308 CGLMCCGRGYNAYTEVLVERCQCKYHWCCYVSCKTCKRTVERYVCK 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 110/320 (34%)
wnt11f2NP_001138276.1 wnt 50..353 CDD:278536 110/320 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586769
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.