DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt2 and wnt5b

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_012814299.1 Gene:wnt5b / 448452 XenbaseID:XB-GENE-480396 Length:375 Species:Xenopus tropicalis


Alignment Length:332 Identity:143/332 - (43%)
Similarity:197/332 - (59%) Gaps:27/332 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LCGRIPGLTPGQRNMCREMPDALIALGEGHQLGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTAS 93
            ||.::.||:||||.:|:...|.::.:|||.:.|.:||||||:..|||||.|...:||..|:...|
 Frog    63 LCSQLTGLSPGQRKLCQLYQDHMVYIGEGAKTGIKECQHQFKHRRWNCSTVDNNSVFGRVMQIGS 127

  Fly    94 REAAYTYAIASAGAAYAVTAACARGNISTCGCDVRHKATPTGGGTPDEPWKWGGCSADVDFGMRY 158
            ||||:||||::||...|::.||..|.:|||||    ..||.....|.: |.||||..:|::|.|:
 Frog   128 REAAFTYAISAAGVVNAISRACREGELSTCGC----SRTPRPKDLPRD-WLWGGCGDNVEYGYRF 187

  Fly   159 ARRFMDARELERD--------SRTLMNLHNNRAGRTLVKKMLRTDCKCHGVSGSCVMKTCWKSLP 215
            |:.|:||||.|::        :|:||||.||.|||..|.|:....||||||||||.:||||..|.
 Frog   188 AKEFVDAREREKNFPKGSEEQARSLMNLQNNEAGRRAVYKLADVACKCHGVSGSCSLKTCWLQLA 252

  Fly   216 PFRLVGDRLMLKYQKAKTVQAVKGKRGLRLVLSRKKHAGTARAQKPVLDWPKRMELIYLEASPNY 280
            .||.||:.:..||..|.:         :||....|......|...|..:     :|:||:.||:|
 Frog   253 DFRKVGEYIKEKYDSAAS---------MRLNKRNKLEQVNQRFNPPTAE-----DLVYLDPSPDY 303

  Fly   281 CERSLQTGSQGTSGRTCQRTGHGPQSCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDES 345
            |..:..|||.||.||.|.:|..|...|:|:|||||::.....:..:|.|:|.|||.|||.:|.|.
 Frog   304 CLYNETTGSLGTHGRQCNKTSEGMDGCELMCCGRGYDQFKTVQVERCHCKFHWCCFVKCKKCTEI 368

  Fly   346 YEEFTCK 352
            .:::.||
 Frog   369 VDQYVCK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 138/323 (43%)
wnt5bXP_012814299.1 Wnt 64..375 CDD:393294 140/329 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47695
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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