DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt2 and Wnt6

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001101696.1 Gene:Wnt6 / 316526 RGDID:1304559 Length:365 Species:Rattus norvegicus


Alignment Length:371 Identity:148/371 - (39%)
Similarity:193/371 - (52%) Gaps:45/371 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLIYIL---------WIMEIRLVSSFTSVMLCGRIPGLTPGQRNMCREMPDALIALGEGHQLGAQ 63
            ||:.:|         |.:...||...||:  |.:...|...|..:|:..|:.:..|..|.:||.:
  Rat    12 LLLLLLCPAHVGGLWWAVGSPLVMDPTSI--CRKARRLAGRQAELCQAEPEVVAELARGARLGVR 74

  Fly    64 ECQHQFRGHRWNCSEVWQRNVFAHVIPTASREAAYTYAIASAGAAYAVTAACARGNISTCGCDV- 127
            |||.|||..|||||.  ....|..|:....||.|:.:||.:|||::|||.||:.|.:..|||.. 
  Rat    75 ECQFQFRFRRWNCSS--HSKAFGRVLQQDIRETAFVFAITAAGASHAVTQACSMGELLQCGCQAP 137

  Fly   128 RHKATPTGG---GTPDEP-----------WKWGGCSADVDFGMRYARRFMDAREL--ERDSRTLM 176
            |.:|.|...   |||..|           |:||||..|||||...:|.||||:..  ..|.|.|:
  Rat   138 RGRAPPRPSGLLGTPGPPGPTGSPDASAAWEWGGCGDDVDFGDEKSRLFMDAQHKRGRGDIRALV 202

  Fly   177 NLHNNRAGRTLVKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVK-GK 240
            .||||.|||..|:...||:|||||:||||.::|||:.|||||.||.||:.::..|..|.... ||
  Rat   203 QLHNNEAGRLAVRSHTRTECKCHGLSGSCALRTCWQKLPPFREVGARLLERFHGASRVMGTNDGK 267

  Fly   241 RGLRLVLSRKKHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRTGHGPQ 305
            ..|..|          |..||    |.|.:|:|...||::|..:.:|||.||.||.|..:.....
  Rat   268 ALLPAV----------RTLKP----PGRADLLYAADSPDFCAPNRRTGSPGTRGRACNSSAPDLS 318

  Fly   306 SCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTC 351
            .||||||||||..:.::....|.|:|.|||.|:|..|....|...|
  Rat   319 GCDLLCCGRGHRQESVQLEENCLCRFHWCCVVQCHRCRVRKELSLC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 139/334 (42%)
Wnt6NP_001101696.1 Wnt_Wnt6 35..365 CDD:381712 142/348 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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