DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt2 and Wnt5b

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_036021918.1 Gene:Wnt5b / 22419 MGIID:98959 Length:394 Species:Mus musculus


Alignment Length:335 Identity:146/335 - (43%)
Similarity:198/335 - (59%) Gaps:33/335 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LCGRIPGLTPGQRNMCREMPDALIALGEGHQLGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTAS 93
            :|.::|||:||||.:|:...:.:..:|||.:.|.:|||||||..|||||.|...:||..|:...|
Mouse    82 VCSQLPGLSPGQRKLCQLYQEHMSYIGEGAKTGIRECQHQFRQRRWNCSTVDNTSVFGRVMQIGS 146

  Fly    94 REAAYTYAIASAGAAYAVTAACARGNISTCGCD--VRHKATPTGGGTPDEPWKWGGCSADVDFGM 156
            ||.|:|||:::||...|::.||..|.:|||||.  .|.|..|       ..|.||||..:|::|.
Mouse   147 RETAFTYAVSAAGVVNAISRACREGELSTCGCSRAARPKDLP-------RDWLWGGCGDNVEYGY 204

  Fly   157 RYARRFMDARELERD--------SRTLMNLHNNRAGRTLVKKMLRTDCKCHGVSGSCVMKTCWKS 213
            |:|:.|:||||.|::        .|.||||.||.|||..|.||....||||||||||.:||||..
Mouse   205 RFAKEFVDAREREKNFAKGSEEQGRALMNLQNNEAGRRAVYKMADVACKCHGVSGSCSLKTCWLQ 269

  Fly   214 LPPFRLVGDRLMLKYQKAKTVQAVK-GKRGLRLVLSRKKHAGTARAQKPVLDWPKRMELIYLEAS 277
            |..||.|||||..||..|..::..: ||  |.|..||             .:.|...:|:|::.|
Mouse   270 LAEFRKVGDRLKEKYDSAAAMRITRQGK--LELANSR-------------FNQPTPEDLVYVDPS 319

  Fly   278 PNYCERSLQTGSQGTSGRTCQRTGHGPQSCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDEC 342
            |:||.|:..|||.||.||.|.:|..|...|:|:|||||::.....:..:|.|:|.|||.|:|.:|
Mouse   320 PDYCLRNETTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDRFKSVQVERCHCRFHWCCFVRCKKC 384

  Fly   343 DESYEEFTCK 352
            .|..:::.||
Mouse   385 TEVVDQYVCK 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 141/326 (43%)
Wnt5bXP_036021918.1 Wnt_Wnt5b 83..394 CDD:381722 144/332 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842353
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.