DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt2 and Wnt2b

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_033546.2 Gene:Wnt2b / 22414 MGIID:1261834 Length:389 Species:Mus musculus


Alignment Length:358 Identity:149/358 - (41%)
Similarity:217/358 - (60%) Gaps:34/358 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLIYILWIMEIRLVSSFTSV------MLCGRIPGLTPGQRNMCREMPDALIALGEGHQLGAQECQ 66
            ||:.:|..:..|:.:|:..:      ::|..||||...||.:|:..||.:.::|||.:...:|||
Mouse    42 LLLLLLLTLPARVDTSWWYIGALGARVICDNIPGLVSRQRQLCQRYPDIMRSVGEGAREWIRECQ 106

  Fly    67 HQFRGHRWNCSEV-WQRNVFAHVIPTASREAAYTYAIASAGAAYAVTAACARGNISTCGCDVRHK 130
            ||||.|||||:.: ....||...:..:|||||:.|||:|||..:|:|.||::|.:|.|.||    
Mouse   107 HQFRHHRWNCTTLDRDHTVFGRAMLRSSREAAFVYAISSAGVVHAITRACSQGELSVCSCD---- 167

  Fly   131 ATP-TGGGTPDE--PWKWGGCSADVDFGMRYARRFMDARELE-RDSRTLMNLHNNRAGRTLVKKM 191
              | |.|...|:  .:.|||||.::.:|:|:|:.|:||:|.. :|:|.||||||||.|||.|::.
Mouse   168 --PYTRGRHHDQRGDFDWGGCSDNIHYGVRFAKAFVDAKEKRLKDARALMNLHNNRCGRTAVRRF 230

  Fly   192 LRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVKGKRGLRLVLSRK--KHAG 254
            |:.:||||||||||.::|||::|..||..||.|..:|..|  ||....:.|.....:|:  :|| 
Mouse   231 LKLECKCHGVSGSCTLRTCWRALSDFRRTGDYLRRRYDGA--VQVTATQDGANFTAARQGYRHA- 292

  Fly   255 TARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRTGHGPQSCDLLCCGRGHNTQ 319
                        .|.:|:|.:.||:||......||.||:||.|.:|..|...|:::|||||::|.
Mouse   293 ------------TRTDLVYFDNSPDYCVLDKAAGSLGTAGRVCSKTSKGTDGCEIMCCGRGYDTT 345

  Fly   320 HIRRTTQCRCQFRWCCEVKCDECDESYEEFTCK 352
            .:.|.|||.|:|.|||.|:|.||..:.:..|||
Mouse   346 RVTRVTQCECKFHWCCAVRCKECRNTVDVHTCK 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 138/322 (43%)
Wnt2bNP_033546.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
wnt 72..378 CDD:306592 141/326 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842326
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42581
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

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