DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt2 and cwn-1

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_493668.1 Gene:cwn-1 / 173399 WormBaseID:WBGene00000857 Length:372 Species:Caenorhabditis elegans


Alignment Length:386 Identity:128/386 - (33%)
Similarity:192/386 - (49%) Gaps:65/386 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IYILWIMEIRLVSSFTSVML---------------CGRIPGLTPGQRNMCREMPDALIALGEGHQ 59
            :.:::|:.|.:|.|.:.:.|               |..:.|||..|...|::..|.:.::..|..
 Worm     7 VILIFILLISIVESLSWLALGLAANRFDRDKPGTSCKSLKGLTRRQMRFCKKNIDLMESVRSGSL 71

  Fly    60 LGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTA-----SREAAYTYAIASAGAAYAVTAACARGN 119
            ....|||.||...||||:.:  ..|...|||..     :||:|:.:||:||..||.||..||||.
 Worm    72 AAHAECQFQFHKRRWNCTLI--DPVTHEVIPDVFLYENTRESAFVHAISSAAVAYKVTRDCARGI 134

  Fly   120 ISTCGCDVRHKATPTGGGTPDEPWKWGGCSADVDFGMRYARRFMDA------------------- 165
            ...||||. .|...:|    ...:::.|||.:|.||:..::.|:|:                   
 Worm   135 SERCGCDY-SKNDHSG----KSQFQYQGCSDNVKFGIGVSKEFVDSAQRRVLMMKDDNGTSLLGP 194

  Fly   166 RELERDSRTLMNLHNNRAGRTLVKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQK 230
            .:|..|...::|||||:|||.:::|.||.:|||||:||||.|:|||.|||.||.:|..:..|:..
 Worm   195 SQLSADGMHMINLHNNQAGRQVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIGMAIKDKFDG 259

  Fly   231 AKTVQAVK--GKRGLRLVLSR---KKHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQ 290
            |..|:.||  |....|:|:..   |:|...              :|:|:..||::||.....|..
 Worm   260 AAEVKVVKEDGIEKPRIVMKNSQFKRHTNA--------------DLVYMTPSPDFCESDPLRGIL 310

  Fly   291 GTSGRTCQRTGHGPQSCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTC 351
            ||.||.|....:....|.|||||||:..:......:|.|:|.:||||:|:.|.:..|::.|
 Worm   311 GTKGRQCTLAPNAIDDCSLLCCGRGYEKKVQIVEEKCNCKFIYCCEVRCEPCQKRIEKYLC 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 121/345 (35%)
cwn-1NP_493668.1 WNT1 44..372 CDD:128408 122/349 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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