DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt2 and Wnt11

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_536326.1 Gene:Wnt11 / 140584 RGDID:621463 Length:354 Species:Rattus norvegicus


Alignment Length:362 Identity:117/362 - (32%)
Similarity:177/362 - (48%) Gaps:37/362 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IHNKLLIYILWIMEIRLVSSFTSVML-------CGRIPGLTPGQRNMCREMPDALIALGEGHQLG 61
            :|..:...|.|     |..|.|...|       |.::.||...|..:||...:.:..:....:..
  Rat    17 LHTGVCYGIKW-----LALSKTPAALALNQTQHCKQLEGLVSAQVQLCRSNLELMRTIVHAAREA 76

  Fly    62 AQECQHQFRGHRWNCSEVWQRNVFAHVIPTASREAAYTYAIASAGAAYAVTAACARGNISTCGCD 126
            .:.|:..|...|||||.:.....:...:...:||:|:.||:::|..::.:..||..|::..|.|.
  Rat    77 MKACRRAFADMRWNCSSIELAPNYLLDLERGTRESAFVYALSAATISHTIARACTSGDLPGCSCG 141

  Fly   127 VRHKATPTGGGTPDEPWKWGGCSADVDFGMRYARRFMDA----RELERDSRTLMNLHNNRAGRTL 187
                  |..|..|....:||||:.::.:|:....:|.||    ::....:..||.|||:..||..
  Rat   142 ------PVPGEPPGPGNRWGGCADNLSYGLLMGAKFSDAPMKVKKTGSQANKLMRLHNSEVGRQA 200

  Fly   188 VKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKA-KTVQAVKGKRGLRLVLSRKK 251
            ::..|.|.||||||||||.::||||.|...|.|...|..:|..| |.|....|.|         |
  Rat   201 LRASLETKCKCHGVSGSCSIRTCWKGLQELRDVAADLKTRYLSATKVVHRPMGTR---------K 256

  Fly   252 HAGTARAQ-KPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRTGHGPQSCDLLCCGRG 315
            |....... :||.|    .||:||::||::|.::.:.||.||..|.|.:|.:|..||||:|||||
  Rat   257 HLVPKDLDIRPVKD----SELVYLQSSPDFCMKNEKVGSHGTQDRQCNKTSNGSDSCDLMCCGRG 317

  Fly   316 HNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTCK 352
            :|....|...:|.|::.|||.|.|..|:.:.|.:.||
  Rat   318 YNPYTDRVVERCHCKYHWCCYVTCRRCERTVERYVCK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 106/321 (33%)
Wnt11NP_536326.1 Wnt_Wnt11 51..354 CDD:381717 106/321 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345743
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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