DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt2 and wnt8b

DIOPT Version :10

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_002936394.1 Gene:wnt8b / 100496786 XenbaseID:XB-GENE-492636 Length:431 Species:Xenopus tropicalis


Alignment Length:383 Identity:125/383 - (32%)
Similarity:169/383 - (44%) Gaps:102/383 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ALGEGHQLGAQECQHQFRGHRWNCSE-------------------------------------VW 80
            ::..|.|.|.:||::||...||||.|                                     ||
 Frog    42 SVAAGAQSGIEECKYQFAWDRWNCPERTLQLSSHSGLRSDSNLHSTGISTAGSSLYDTGPTSPVW 106

  Fly    81 QRN----VFAHV-------------IP-------------------TASREAAYTYAIASAGAAY 109
            ..|    :|:.:             ||                   .|:||.|:.:||:|||..|
 Frog   107 STNFNRILFSKLESHFNKTFLSRLQIPFPQSHTMQSATSLSPGFLSPANRETAFVHAISSAGVMY 171

  Fly   110 AVTAACARGNISTCGCDVRHKATPTGGGTPDEPWKWGGCSADVDFGMRYARRFMDARELERDSRT 174
            .:|..|:.|:...||||........|.|     |.|||||.:|.||...:::|:||.|..:|:|.
 Frog   172 TLTRNCSLGDFDNCGCDDSRNGQLGGQG-----WLWGGCSDNVGFGETISKQFVDALETGQDARA 231

  Fly   175 LMNLHNNRAGRTLVKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVKG 239
            .||||||.|||..||..::..||||||||||..:|||..||.||.||:.|..||.||..|....|
 Frog   232 AMNLHNNEAGRKAVKSTMKRTCKCHGVSGSCTTQTCWLQLPEFREVGNYLKEKYSKALKVDLFHG 296

  Fly   240 KRGLRLVLSRKKHAGTARAQKPVLDWP----KRMELIYLEASPNYCERSLQTGSQGTSGRTCQRT 300
                         ||.:.|.:..:...    .:.||::||.||:||..:...|..||.||.|.:.
 Frog   297 -------------AGNSAASRGAIAETFRSISKKELVHLEDSPDYCLENKTLGLLGTEGRECLKR 348

  Fly   301 GHG-----PQSCDLLC--CGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTC 351
            |..     .:||..||  ||.....:.....:.|.|:|.|||.|||::|.:|..::.|
 Frog   349 GKALSKWEKRSCRRLCGDCGLAVEERRADMVSSCNCKFHWCCAVKCEQCRKSVTKYFC 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 Wnt_Wnt7 29..352 CDD:381713 125/383 (33%)
wnt8bXP_002936394.1 Wnt 30..407 CDD:393294 125/383 (33%)

Return to query results.
Submit another query.