DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt2 and wnt1

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_002935152.1 Gene:wnt1 / 100491444 XenbaseID:XB-GENE-485280 Length:372 Species:Xenopus tropicalis


Alignment Length:371 Identity:136/371 - (36%)
Similarity:190/371 - (51%) Gaps:44/371 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LWIMEIRLVSSFTSVMLCGR-------------IPG----------------LTPGQRNMCREMP 48
            ||::....:|:..:|...|:             :||                |:..|:.:.|:.|
 Frog    13 LWVLAFSSLSNTIAVNNSGKWWGIVNVASAGNVLPGSDAQPVPLVLDPSLQLLSRRQKRLIRQNP 77

  Fly    49 DALIALGEGHQLGAQECQHQFRGHRWNCSEVWQRNVFAHVIPTASREAAYTYAIASAGAAYAVTA 113
            ..|.::..|.....:||:.|||..||||.......||..:|....||.|:.:||.|||..::|..
 Frog    78 GILQSITRGLHSAIRECKWQFRNRRWNCPTGTGNQVFGKIINRGCRETAFVFAITSAGVTHSVAR 142

  Fly   114 ACARGNISTCGCDVRHKATPTGGGTPDEPWKWGGCSADVDFGMRYARRFMDARELERDSRTLMNL 178
            :|:.|:|.:|.||.|.:    |.|.||  |.|||||.:::||....|.|:|:.|..||.:.|:||
 Frog   143 SCSEGSIESCSCDYRRR----GPGGPD--WHWGGCSDNIEFGRFIGREFVDSSERGRDLKYLVNL 201

  Fly   179 HNNRAGRTLVKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKA-KTVQAVKGKR- 241
            |||:|||..|...:|.:|||||:||||.::|||..|||||.|||.|..::..| |...:..|.. 
 Frog   202 HNNQAGRLTVLTEMRQECKCHGMSGSCSLRTCWMRLPPFRSVGDALKDRFDGASKVTYSNNGSNR 266

  Fly   242 -GLRLVLSRKKHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRTGHGPQ 305
             |.|   |...|   ...:.|....|...:|:|.|.|||:|..|.:.|:.||:||.|..|..|..
 Frog   267 WGSR---SDPPH---LEPENPTHALPSSQDLVYFEKSPNFCSASEKNGTPGTTGRICNSTSLGLD 325

  Fly   306 SCDLLCCGRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTC 351
            .|:|||||||:.::..:.|.:|.|.|.|||.|.|..|..|.....|
 Frog   326 GCELLCCGRGYRSRAEKVTERCHCTFHWCCHVTCLNCTSSQIVHEC 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 129/319 (40%)
wnt1XP_002935152.1 Wnt_Wnt1 65..372 CDD:381707 129/319 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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