DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt2 and wnt3

DIOPT Version :10

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001096552.1 Gene:wnt3 / 100125198 XenbaseID:XB-GENE-479567 Length:354 Species:Xenopus tropicalis


Alignment Length:362 Identity:161/362 - (44%)
Similarity:212/362 - (58%) Gaps:31/362 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIYILWIM-------------EIRLVSSFTSV----MLCGRIPGLTPGQRNMCREMPDALIALGE 56
            |::.|||.             .:.|...::::    :|||.||||.|.|...||...:.:.::.|
 Frog     6 LLHFLWIFSAAPVLAGYPIWWSLALGQQYSTLGSQPILCGSIPGLVPKQMRFCRNYIEIMPSVAE 70

  Fly    57 GHQLGAQECQHQFRGHRWNCSEVWQR-NVFAHVIPTASREAAYTYAIASAGAAYAVTAACARGNI 120
            |.:||.|||||||||.||||:.:... .:|..|:..|:||:|:.:||||||.|:|||.:||.|:.
 Frog    71 GIKLGIQECQHQFRGRRWNCTTIHDSLAIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGSS 135

  Fly   121 STCGCDVRHKATPTGGGTPDEPWKWGGCSADVDFGMRYARRFMDARELERDSRTLMNLHNNRAGR 185
            :.||||..||      |:|.:.|||||||.|.|||:..:|.|.||||...|:|:.||.|||.|||
 Frog   136 TICGCDSHHK------GSPGDGWKWGGCSEDADFGVLVSREFADARENRPDARSAMNRHNNEAGR 194

  Fly   186 TLVKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVKGKRGLRLVLSRK 250
            ..:...:...|||||:||||.:||||.|.|.||.:||.|..||..|..:...|.:..       :
 Frog   195 ATILDHMHLRCKCHGLSGSCEVKTCWWSQPDFRAIGDHLKDKYDSASEMSVEKHRES-------R 252

  Fly   251 KHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRTGHGPQSCDLLCCGRG 315
            ....|.||:..:...|...:|:|.|.|||:||.:.:|||.||.||:|..|.||...|||||||||
 Frog   253 GWVETLRAKYSLFKPPTERDLVYYETSPNFCEPNPETGSFGTQGRSCNVTSHGIDGCDLLCCGRG 317

  Fly   316 HNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTCK 352
            |||:..:|..:|.|.|.|||.|.|.||...|:..|||
 Frog   318 HNTRTEKRKEKCHCIFHWCCYVSCQECVRIYDVHTCK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 Wnt_Wnt7 29..352 CDD:381713 154/323 (48%)
wnt3NP_001096552.1 Wnt_Wnt3_Wnt3a 41..354 CDD:381709 154/325 (47%)

Return to query results.
Submit another query.