DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt2 and wnt2

DIOPT Version :9

Sequence 1:NP_476810.1 Gene:Wnt2 / 35975 FlyBaseID:FBgn0004360 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_012815404.1 Gene:wnt2 / 100038261 XenbaseID:XB-GENE-486595 Length:365 Species:Xenopus tropicalis


Alignment Length:365 Identity:146/365 - (40%)
Similarity:222/365 - (60%) Gaps:33/365 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWKIHNKLLIYIL-------WIMEIRLVSSFTSVMLCGRIPGLTPGQRNMCREMPDALIALGEGH 58
            :|.:....|:::.       |.|...:.||.:|.::|..||||...||.:|:..|:.:..:|.|.
 Frog     8 IWFLVPTTLLFLTPEAANSWWYMGAVVTSSSSSRVMCNNIPGLVTRQRQLCQRYPEIMQVIGLGA 72

  Fly    59 QLGAQECQHQFRGHRWNCSEVWQR--NVFAHVIPTASREAAYTYAIASAGAAYAVTAACARGNIS 121
            .....|||||||.|||||: :.:|  ::|..:|..:|||:|:.:||:|||..:|:|.||::|.:.
 Frog    73 VEWTTECQHQFRHHRWNCN-IMERDQSLFGKLILRSSRESAFVHAISSAGIVFAITRACSQGELK 136

  Fly   122 TCGCDVRHKATPTGGGTPDEP---WKWGGCSADVDFGMRYARRFMDARELE-RDSRTLMNLHNNR 182
            :|.||      ||..|:..:.   :.|.|||.::|:|:|:||.|:||:|.: :|:|.|||||||:
 Frog   137 SCSCD------PTKKGSSKDSKGGFDWDGCSDNIDYGIRFARTFVDAKERKGKDARALMNLHNNK 195

  Fly   183 AGRTLVKKMLRTDCKCHGVSGSCVMKTCWKSLPPFRLVGDRLMLKYQKAKTVQAVKGKRGLRLVL 247
            |||..||:.::.:||||||||||.::|||.::..||..||.|..||..|  :|.|..:.|....:
 Frog   196 AGRKAVKRFMKQECKCHGVSGSCTVRTCWMAMGDFRKSGDYLRRKYNGA--IQVVMNQDGTGFTV 258

  Fly   248 SRKKHAGTARAQKPVLDWPKRMELIYLEASPNYCERSLQTGSQGTSGRTCQRTGHGPQSCDLLCC 312
            :      ..|.:||.     ..:|:|.|.||:||.|....||.||:||.|.:|..|..||:::||
 Frog   259 A------NTRFKKPT-----NNDLVYFENSPDYCVRDRDVGSLGTAGRICNQTSRGMDSCEVMCC 312

  Fly   313 GRGHNTQHIRRTTQCRCQFRWCCEVKCDECDESYEEFTCK 352
            |||::|..|.:.::|.|:|.|||.|:|.:|.|:.:..|||
 Frog   313 GRGYDTARITKMSKCECKFHWCCSVRCKDCIETVDIHTCK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt2NP_476810.1 wnt 36..352 CDD:278536 133/321 (41%)
wnt2XP_012815404.1 Wnt_Wnt2 41..352 CDD:381719 137/330 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.