DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Camta and AT3G16940

DIOPT Version :9

Sequence 1:NP_001137624.1 Gene:Camta / 35974 FlyBaseID:FBgn0287478 Length:2044 Species:Drosophila melanogaster
Sequence 2:NP_188319.2 Gene:AT3G16940 / 820950 AraportID:AT3G16940 Length:845 Species:Arabidopsis thaliana


Alignment Length:679 Identity:152/679 - (22%)
Similarity:242/679 - (35%) Gaps:209/679 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1019 QQITTTSTAATCDNLMSANALSEQDSHTVNNQATEAPNRSQLQS-----QSQSLSLNQNGCATYS 1078
            |:..|||.    |::.|..::|||          ..|||...:.     ::..:||:......: 
plant   146 QEAATTSG----DSISSPISVSEQ----------TFPNRVAAEDIDTVVRNHDISLHDINTLDW- 195

  Fly  1079 ASSDNSSQISDESSSFGGNNQNSSNSSTSEEEPQVEALSFFNETLDLSQEDIQRTLIANMPYNTT 1143
               |.....:|.      |||::         |.|:.||:|.|.|.                  .
plant   196 ---DELLVPTDL------NNQSA---------PTVDNLSYFTEPLQ------------------N 224

  Fly  1144 AAGATAPSTTITTGNTKLE-LSQQETKEKPAMG-------TETATEIEDDETDDVFANLDAFDML 1200
            ||..||.....|..:..|: |.....:.:.:.|       :|:...:||          .:|:.:
plant   225 AANGTAEHGNATVADGSLDALLNDGPQSRESFGRWMNSFISESNGSLED----------PSFEPM 279

  Fly  1201 VEFPELDLDDKQALNNTALEQSSFLGESAPSQPRKVHNICDFSPEWSYTEGGVKVLVAGPWTSS- 1264
            | .|..|....||:.:           |..:.|.:|.||.|.||.|:|:....|:||.|....| 
plant   280 V-MPRQDPLAPQAVFH-----------SHSNIPEQVFNITDVSPAWAYSSEKTKILVTGFLHDSY 332

  Fly  1265 ----NGGAYTVLFDAQPVPTQLVQEGVLRCYCPAHEAGFVTLQVACGGFL-VSNSVMFEYKLSLL 1324
                ....|.|..|. .||.:.:|.||.||..|.|..|.|.|.::..|.. :|....||::...:
plant   333 QHLERSNLYCVCGDF-CVPAEYLQAGVYRCIIPPHSPGMVNLYLSADGHKPISQCFRFEHRAVPV 396

  Fly  1325 AD--APFDATSSNDCLYK------------FTLLNRLSTID-----------EKLQVKTEHELTT 1364
            .|  .|.|   :.|..::            ||..|:|:.:.           :||..||.|.|  
plant   397 LDKTVPED---NQDSKWEEFEFQVRLSHLLFTSSNKLNVLSSKISPHNLRDAKKLASKTNHLL-- 456

  Fly  1365 DNTALYLEPNFEEKLVAYCHKLIKHAW--SMPSTAASWTV------------GLRGMTLLHLAAA 1415
             |:..||..:.:...|:: .:...|.:  |:.:....|.:            ..:|:.::||.|:
plant   457 -NSWAYLVKSIQGNKVSF-DQAKDHLFELSLKNRLKEWLMEKVLEGRNTLDYDSKGLGVIHLCAS 519

  Fly  1416 LGYA------KLVGAMLNWRSENPHIILETELDALSQDVYGFTPLAWACVRGH--VECSLLLYKW 1472
            |||.      .|.|..||:|                 |..|:|.|.||...|.  :..:||....
plant   520 LGYTWSVQLFSLSGLSLNFR-----------------DKQGWTALHWAAYYGREKMVAALLSAGA 567

  Fly  1473 NHNALKIKTQ-----------AQQTPLD-LASMRGHKVLLAQMYRL--------EKERCRKPQLR 1517
            ..|.:...|:           |||...| ||:....|.|:||...:        :.|.|:...| 
plant   568 RPNLVTDSTKDNLGGCMAADLAQQNGYDGLAAYLAEKCLVAQFRDMKIAGNITGDLEACKAEML- 631

  Fly  1518 GGLANLSMNMGVEAEAEEQ-HQSFSAF--DLELQRKHDGVFLRPVAVHSNQSPPNGSSRYSKRSS 1579
                    |.|...|.|:. ..:.:|:  ..|...:..|.| |..|:.            :.|||
plant   632 --------NQGTLPEDEQSLKDALAAYRTAAEAAARIQGAF-REKALK------------AARSS 675

  Fly  1580 IDSGINMDIRSKSGKPLARLHSNFESHDS 1608
            :....|.:..:||.....::.:.|..:|:
plant   676 VIQFANKEEEAKSIIAAMKIQNAFRKYDT 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamtaNP_001137624.1 CG-1 422..538 CDD:198144
TIG 1242..1319 CDD:280079 27/82 (33%)
ANK <1405..1497 CDD:238125 29/111 (26%)
ANK repeat 1405..1447 CDD:293786 12/47 (26%)
Ank_2 1410..1500 CDD:289560 29/109 (27%)
ANK repeat 1449..1481 CDD:293786 9/33 (27%)
AT3G16940NP_188319.2 CG-1 29..146 CDD:198144 152/679 (22%)
TIG 306..390 CDD:396414 28/84 (33%)
Ank_2 514..604 CDD:403870 28/106 (26%)
ANK repeat 514..540 CDD:293786 11/42 (26%)
ANK repeat 542..572 CDD:293786 9/29 (31%)
COG5022 <691..>836 CDD:227355 2/14 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I2424
eggNOG 1 0.900 - - E1_KOG0520
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 203 1.000 Inparanoid score I1297
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001351
OrthoInspector 1 1.000 - - otm2629
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23335
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1066
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
99.010

Return to query results.
Submit another query.