DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Camta and Camta2

DIOPT Version :9

Sequence 1:NP_001137624.1 Gene:Camta / 35974 FlyBaseID:FBgn0287478 Length:2044 Species:Drosophila melanogaster
Sequence 2:XP_038941411.1 Gene:Camta2 / 287462 RGDID:1311296 Length:1230 Species:Rattus norvegicus


Alignment Length:1701 Identity:483/1701 - (28%)
Similarity:668/1701 - (39%) Gaps:585/1701 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 STTTQTNVPLGNDGEPIKLPDN-LESLPRADSFPSQRHRWNTNEEIAAILISFDKHGEWQSKEVR 454
            :|...|.|...:....|.||.. ||.|||....|.:|.|||||||||:.||:|:||.||.|...:
  Rat    25 NTKDTTEVAENSHHLKIFLPKKLLECLPRCPLLPPERLRWNTNEEIASYLITFEKHDEWLSCAPK 89

  Fly   455 TRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTE-----CIYGCYVHSAILP 514
            |||::||::||:||||:||:|||.|||||||||||||||||||||.|     |:|||||||:|:|
  Rat    90 TRPQNGSIILYNRKKVKYRKDGYLWKKRKDGKTTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVP 154

  Fly   515 TFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTK---EELVSQLKPMLST 576
            ||||||||||||||||||||||||..:|..........::..|::||.|   |||:.|||||...
  Rat   155 TFHRRCYWLLQNPDIVLVHYLNVPALEDCGKGCSPIFCSISSDRREWLKWSREELLGQLKPMFHG 219

  Fly   577 INSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDC--GCGDGGCVDGKTCT-HP 638
            |.    ...||.:|   ..:||.:|.|:::... ::.|.......|  |.|.|......:.| |.
  Rat   220 IK----WSCGNGLE---EFSVEQLVQQILDTHP-TKPAPRTHACLCSGGLGSGSLTHKCSSTKHR 276

  Fly   639 VMR---RSAAMLKSSVQEKRLGEPFNGNTPNVVVASKLYSRWAERPRQHVDNHGQFHNVTQQLPQ 700
            ::.   ...|:..:|:...:..||     |.::....     .|.|:.|........:.:....:
  Rat   277 IISPKVEPRALTLASISHSKPPEP-----PPLIAPLP-----PELPKAHTSPSSSSSSSSSGFAE 331

  Fly   701 ESAIKFQIIPPQQQQQQDGNYQQQQYRGGSQMLAARSNLVMQQQQQHQQQQQYHQQQQQQQQQQQ 765
            ...|:     |.....:.|:     .|||:.:|....                            
  Rat   332 PLEIR-----PSPPTSRGGS-----SRGGTAILLLTG---------------------------- 358

  Fly   766 QHQQQQQHLSLQRFVASQGQNSVHLNQQHRLQIANTTITATASDPATTLAAAAAVAAASGATPVA 830
             .:|:...|:..|.:|||                        ::|...::.|..|.:...|.|  
  Rat   359 -LEQRAGGLTPTRHLASQ------------------------AEPRPPVSLAVVVGSEPSAPP-- 396

  Fly   831 LNIMDTELIENQNHMTANKITNSGSSNSSSSNASKQLAGQTNNKLNVVNNNDPGNNNFMYNQQQQ 895
                                       :..|.|.                 ||  :.|:      
  Rat   397 ---------------------------APPSPAF-----------------DP--DRFL------ 409

  Fly   896 LNASSNSNNSSQQQQQQQQQHYYKLQQTTATPTSGQPPPLAQVQPHSLAQPPVEAMCMSPEHRSS 960
                    ||.|:.|               |...||     .|.|.            .||...:
  Rat   410 --------NSPQRGQ---------------TYGGGQ-----GVNPD------------FPEAEGT 434

  Fly   961 SQPTPATSSAGSIPSSVSVSISVSTSTPTPAPTSISTPTSGTSSTSSSLQSIIDGNQQQQITTTS 1025
            ..|.||...|.::             .|..|...: .|.||.|....:...|.|.:..:::....
  Rat   435 HTPCPALEPAAAL-------------EPQAAARGL-PPQSGASGRRGNKFFIQDDDSGEELKGPG 485

  Fly  1026 TAATCDNLMSANALSEQDSHTVNNQATEAPNRSQLQSQSQSLSLNQNGCATYSASSDNSSQISDE 1090
            |.                      ....:|..|   |.|...:|..:|.||..            
  Rat   486 TV----------------------PPVPSPPPS---SPSSPAALQPSGRATRG------------ 513

  Fly  1091 SSSFGGNNQNSSNSSTSEEEPQVEALSFFNETLDLSQEDIQRTLIANMPYNTTAAGATAPSTTIT 1155
            .:.|||     |..||||.||  .:||.|        .|:...||.:     .|.|..|||..::
  Rat   514 ETLFGG-----SAGSTSELEP--FSLSSF--------PDLMGELITD-----EAPGVPAPSPQLS 558

  Fly  1156 TGNTKLELSQQETKEKPAMGTETATEIEDDETDDVFANLDAFDMLVEFPELDLDDKQALNNTALE 1220
                            |.:.|                                            
  Rat   559 ----------------PVLNT-------------------------------------------- 563

  Fly  1221 QSSFLGESAPSQPRKVHNICDFSPEWSYTEGGVKVLVAGPWTSSNGGAYTVLFDAQPVPTQLVQE 1285
                              |.||||||||.|||||||:.||||.: ...|:.:||...||..|||.
  Rat   564 ------------------ITDFSPEWSYPEGGVKVLITGPWTEA-AEHYSCVFDHIAVPASLVQP 609

  Fly  1286 GVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAP---FDATSSNDCLYKFTLLNRL 1347
            |||||||||||.|.|:||||.....:|.||:|||:.......|   .|..|.:|..::.::|.||
  Rat   610 GVLRCYCPAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPSTQLDWLSLDDSQFRMSILERL 674

  Fly  1348 STIDEKL-----------------QVKTEHELTTDNTALYLEPNFEEKLVAYCHKLI-KHAWSMP 1394
            ..:::::                 .::.|.:          .|.||.::|.....:| :..|..|
  Rat   675 EQMEKRMAEIAAAGQAPGQGPEAPPIQDEGQ----------GPGFEARVVVLVESMIPRSTWRGP 729

  Fly  1395 STAASWTVGLRGMTLLHLAAALGYAKLVGAMLNWRS-ENPHIILETELDALSQDVYGFTPLAWAC 1458
            ......: ..|||:|||||||.|||:|:..:..||| |...:.||.|.|.|:.|.:..|||.|||
  Rat   730 ERLMHGS-PFRGMSLLHLAAAQGYARLIETLSQWRSVETGSLDLEQEADPLNVDHFSCTPLMWAC 793

  Fly  1459 VRGHVECSLLLYKWNHNALKIKTQAQQTPLDLASMRGHKVLLAQMYRLEKERCRKPQLRGGLANL 1523
            ..||:|.::||:.||..||.|.....:.||.:|..||| |.||        ||.:          
  Rat   794 ALGHLEAAVLLFCWNRQALSIPDSLGRLPLSVAHSRGH-VRLA--------RCLE---------- 839

  Fly  1524 SMNMGVEAEAEEQHQSFSAFDLELQRKHDGVFLRPVAVH-SNQSPPNGSSRYSKRSSIDSGINMD 1587
                      |.|.|       ||..:|      |:|:. .:.||..|.|..|..|.:..|    
  Rat   840 ----------ELQRQ-------ELSVEH------PLALSPQSSSPDTGLSSVSSPSELSDG---- 877

  Fly  1588 IRSKSGKPLARLHSNFESHDSYALGVD-SP-----------LDSLTGTNCLLS------PLRKMD 1634
                          .|....:|:...| ||           ::::.|.   ||      ||..||
  Rat   878 --------------TFSVTSAYSSAPDGSPPPAPMLASEISMETIPGQ---LSFGAPETPLLLMD 925

  Fly  1635 FALCEVSTGESSP--------VHDKDC--DDNSTSATDVTIGNDLVLPDAVVGDSDAKVLTLAEH 1689
            :.  ..::.||:|        ..|:..  |.:|..|.|       |:|        ..:::||:.
  Rat   926 YE--ATNSKESAPSPSGLPLAQDDRAAPEDADSPPAVD-------VIP--------VDMISLAKQ 973

  Fly  1690 IIAAMPERIKNE-ADEMMVLG-SPLTEPLT---SESSALTDSFMDPLLDSLPNTHFDSDFSFDFH 1749
            ||.|.|||||.| ..|:...| ||.....|   ||:.:...|:::. :|..|::.|.|:..|:  
  Rat   974 IIEATPERIKREDFSELPEAGASPREHTGTVGLSETMSWLASYLEN-VDHFPSSAFPSELPFE-- 1035

  Fly  1750 DHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISSYPF 1814
                                                  ...|:.||: ....|||.||  :|...
  Rat  1036 --------------------------------------RGRPAIPPA-PSWAEFLSAS--TSGKM 1059

  Fly  1815 EADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERSAATVIQNYYRRYKQ------ 1873
            |:||:.|||:|.|||||||||:.||.|:|.|||| :|:||  :..||.|||..||:|||      
  Rat  1060 ESDFALLTLSDHEQRELYEAARVIQTAFRKYKGR-RLKEQ--QEVAAAVIQRCYRKYKQLTWIAL 1121

  Fly  1874 -YAYYRQMTNAALVIQHGYRSYRRNKRFKKSGLCLSSSSDHGSVSSNSQCLSSFYDHYKQDQQQL 1937
             :|.|::||.||::||..:|||...|||::|.........|             |..|::     
  Rat  1122 KFALYKKMTQAAILIQSKFRSYYEQKRFQQSRRAAVLIQQH-------------YRSYRR----- 1168

  Fly  1938 HELGSQPSTPKETSPSGPL----KRTYSQSTQNQAARKIQQFMRQSRIKLQKERAEKEKLVHQRR 1998
                 :|..|..  |||||    |.|:....|:||||||.:|:|:.|              |:.|
  Rat  1169 -----RPGPPHR--PSGPLPSRNKGTFLTKKQDQAARKIMRFLRRCR--------------HRMR 1212

  Fly  1999 AEYLQNLQFQG 2009
             |..||.:.:|
  Rat  1213 -ELKQNQELEG 1222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamtaNP_001137624.1 CG-1 422..538 CDD:198144 89/120 (74%)
TIG 1242..1319 CDD:280079 47/76 (62%)
ANK <1405..1497 CDD:238125 45/92 (49%)
ANK repeat 1405..1447 CDD:293786 23/42 (55%)
Ank_2 1410..1500 CDD:289560 43/90 (48%)
ANK repeat 1449..1481 CDD:293786 16/31 (52%)
Camta2XP_038941411.1 CG-1 57..178 CDD:198144 89/120 (74%)
TIG 563..643 CDD:396414 50/142 (35%)
ANK repeat 739..782 CDD:293786 23/42 (55%)
Ank_2 744..836 CDD:403870 45/100 (45%)
PTZ00322 772..>911 CDD:140343 53/198 (27%)
ANK repeat 784..816 CDD:293786 16/31 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2870
eggNOG 1 0.900 - - E1_KOG0520
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 559 1.000 Inparanoid score I1060
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D161424at33208
OrthoFinder 1 1.000 - - FOG0001351
OrthoInspector 1 1.000 - - otm44430
orthoMCL 1 0.900 - - OOG6_105843
Panther 1 1.100 - - O PTHR23335
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1066
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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