DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Camta and camt-1

DIOPT Version :9

Sequence 1:NP_001137624.1 Gene:Camta / 35974 FlyBaseID:FBgn0287478 Length:2044 Species:Drosophila melanogaster
Sequence 2:NP_494795.2 Gene:camt-1 / 173786 WormBaseID:WBGene00020251 Length:1185 Species:Caenorhabditis elegans


Alignment Length:1729 Identity:349/1729 - (20%)
Similarity:544/1729 - (31%) Gaps:738/1729 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 QQQQQQSTTTQTNVP----LGNDGEPIKLPDNLESLPRA-DSFPSQRHRWNTNEEIAAILI--SF 442
            |.||.|:.|....:|    |.:...|...||.  :.|:| :.||..:.:|||.|||..|::  :.
 Worm    36 QMQQPQNETANNFIPSIQLLWSTDPPQIRPDG--TYPQAVELFPCFKDKWNTKEEILNIILAANA 98

  Fly   443 DKHGEWQSKEVRTRPKSGSLLLYSR-KKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGC 506
            |......:.:...||.|.|..:|.| ....|:.|||.||||.:||..||||:.||:.|...|...
 Worm    99 DPKSNCVTVQSSPRPCSSSQFIYPRLDNAWYKNDGYIWKKRTNGKQNREDHLNLKISGHPHISAK 163

  Fly   507 YVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSI--TLWGDKKEWTKEELVSQ 569
            |:||||:||||||.|.:..:...||||||||  ..:||:...|..|  ::..:|...:..:|..|
 Worm   164 YIHSAIVPTFHRRSYSVPDSDCHVLVHYLNV--KTNNKIDDQAEEIARSMIENKVFISLSQLHDQ 226

  Fly   570 LKPM-LSTINSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDGGCVDGK 633
            |.|: |.|:|                  |..:|.::.|.                          
 Worm   227 LSPIFLQTLN------------------VNQLVAEINEH-------------------------- 247

  Fly   634 TCTHPVMRRSAAMLKSSVQEKRLGEPFNGNTPNVVVASKLYSRWAERPRQHVDNHGQFHNVTQQL 698
                        :.|..|           |.|                             |..|
 Worm   248 ------------LKKKGV-----------NLP-----------------------------TSPL 260

  Fly   699 PQESAIKFQIIPPQQQQQQDGNYQQQQYRGGSQMLAARSNLVMQQQQQHQQQQQYHQQQQQQQQQ 763
            |||.:               .:..::..|..|...|.|                           
 Worm   261 PQEPS---------------SSTSRELERRNSCSSAFR--------------------------- 283

  Fly   764 QQQHQQQQQHLSLQRFVASQGQNSVHLNQQHRLQIANTTITATASDPATTLAAAAAVAAASGATP 828
                               :|.:||.|.:|   ..||:.|.|                       
 Worm   284 -------------------KGLSSVALRRQ---PSANSEIDA----------------------- 303

  Fly   829 VALNIMDTELIENQNHMTANKITNSGSSNSSSSNASKQLAGQTNNKLNVVNNNDPGNNNFMYNQQ 893
                          ||: ...:...|.:.|||            ::::::               
 Worm   304 --------------NHI-GTMLKRFGCNGSSS------------DRISII--------------- 326

  Fly   894 QQLNASSNSNNSSQQQQQQQQQHYYKLQQTTATPTSGQPPPLAQVQPHSLAQPPVEAMCMSPEHR 958
                                                                             
 Worm   327 ----------------------------------------------------------------- 326

  Fly   959 SSSQPTPATSSAGSIPSSVSVSISVSTSTPTPAPTSISTPTSGTSSTSSSLQSIIDGNQQQQITT 1023
               |||                                            :|:.           
 Worm   327 ---QPT--------------------------------------------MQNF----------- 333

  Fly  1024 TSTAATCDNLMSANALSEQDSHTVNNQATEAPNRSQLQSQSQSLSLNQNGCATYSASSDNSSQIS 1088
                                                     ||:..:||             .::
 Worm   334 -----------------------------------------QSIRSHQN-------------HVA 344

  Fly  1089 DESSSFGGNNQNSSNSSTSEEEPQVEALSFFNETLDLSQEDIQRTLIANMPYNTTAAGATAPSTT 1153
            .||.|..|:  ..|...|.||:...:.||..:.|              |:   :|.|.|.|....
 Worm   345 MESRSPSGD--GDSRPITFEEDASYQQLSIKSST--------------NV---STPASAFAEKMK 390

  Fly  1154 ITTGNTKLELSQQETKEKPAMGTETATEIEDDETDDVFANLDAFDMLVEFPELDLDDKQALNNTA 1218
            |.:|      ||:.....|:..:.|:|.:                    .|              
 Worm   391 IRSG------SQESPMGPPSSSSVTSTSL--------------------IP-------------- 415

  Fly  1219 LEQSSFLGESAPSQPRKVHNICDFSPEWSYTEGGVKVLVAGPWTSSNGGAYTVLFD-AQPVPTQL 1282
                                |.:.:|..|..:||.|:||.|.: ...|..|.:.|. .:.:|..|
 Worm   416 --------------------IIEMTPSSSSLKGGQKMLVVGGY-YRKGHEYKISFGRGRMMPAVL 459

  Fly  1283 VQEGVLRCYC-PAHEAGFVTLQVACGGFLVSNSVMFEY--------------------KLSLLAD 1326
            :..|||.|.. |:.:...|.::|.|.|..:|.:..|.|                    |:.::|.
 Worm   460 IHAGVLSCVIPPSAKPEVVQIRVFCNGQAISTASEFTYEPQSAHLIKENDDTLVQIFEKIRIMAC 524

  Fly  1327 APFDATS------SNDCLYKFTLLNRLSTIDEKLQVKTEHELTTDNTALYLEPNFEEKLVAYCHK 1385
            | |:|.|      |:.|: :..|.|.:..||        :|:::.|             :.|..:
 Worm   525 A-FNAYSSIENIQSSSCM-ESLLANIVQQID--------NEVSSQN-------------LNYKTE 566

  Fly  1386 LIKHAWSMPSTAASWTVGLRGMTLLHLAAALGYAKLVGAMLNWRSENPHIILETELDALSQDVYG 1450
            |:..:...||           .|:|||.|:|.|.:|..|:::...:.|..   .|.|..::|..|
 Worm   567 LLNGSAHFPS-----------KTVLHLVASLDYDRLFEALIDLSRKVPAC---REFDIFARDNDG 617

  Fly  1451 FTPLAWACVRGHVECSLLLYKWNHNALKIKTQAQQTPLDLASMRGHKVLLAQMYRLEKERCRKPQ 1515
            .|||..||.......:.|:...:.:|:.:.....:||:::|.  .|.:.:......|:||....:
 Worm   618 STPLHTACKNSASRIARLIISIDSSAIDVVDDRGRTPVEVAP--EHSIDMLSDKNNEEERVNATE 680

  Fly  1516 LRGGLANLSMNMGVEAEAEEQHQSFSAFDLELQRKHDGVFLR-PVAVHSNQSPPNGSSRYSKRSS 1579
            |      ..|..|            .||..:  :..||...| |:|...:......:|.||..|.
 Worm   681 L------WVMTNG------------KAFTTD--KILDGKISRAPIAEKPDDLLREATSSYSIMSE 725

  Fly  1580 IDSGINMDIRSKSGKPLARLHSNFESHDSYALGVDSPLDSLTGTNCLLSPLRKMDFALCEVSTGE 1644
            :..|           |:                    |.:.|...|                   
 Worm   726 MYEG-----------PM--------------------LQAGTSREC------------------- 740

  Fly  1645 SSPVHDKD----CDDNSTSA--TDVTIGNDLVLPDA----------------VVGDSDAKVLTLA 1687
                 |:|    ||.:||..  .::.:..|:.:||:                |..::.|::..||
 Worm   741 -----DEDCESCCDPDSTQQLHVEIAMDTDVHVPDSPKMARLFHAVTSPGIVVPPNARARMADLA 800

  Fly  1688 EHIIAAMPERIKNEADEMMV----------LGSPLTEPL---TSESSALTDSFMDPLLDSLPNTH 1739
            ..||.|:|:|||..::..|.          .|.  .||:   .:..|..|||         ||. 
 Worm   801 RQIIEALPDRIKRNSEVSMCPDEEDPGQNHHGG--VEPMFYQQASCSMSTDS---------PNM- 853

  Fly  1740 FDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYS--ILGT------DPSVSSPSPPPS 1796
              .|..||......| :|:.|     .|.|:...::.||.|  :..|      |.|.:|.|...:
 Worm   854 --MDDYFDMMATETR-NDIFT-----EPRSTETTETSASKSAQLFATHCNFFDDRSFASSSTRAN 910

  Fly  1797 T---------KQLTEF--LHASSISSYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQK 1850
            |         |.|.||  :|...... |.:...:.|...|.|||::||||..||:|||.|:.|..
 Worm   911 TFESDTLDFDKDLGEFFTIHVDRFVD-PIQQRLANLKYNDDEQRDVYEAAMVIQRAYRVYRARST 974

  Fly  1851 LEEQNK-ERSAATVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSG---LCLSSSS 1911
            ...|.. ||.||..||..||||||:.|::::.|||:|:|..:|..:|:.  |:.|   ..::|..
 Worm   975 TRRQEDIERRAALKIQGCYRRYKQFCYFKKLHNAAIVVQKHFRMRKRDD--KEEGAVEAVIASVP 1037

  Fly  1912 DHGSVSSNSQCLSSFYDHYKQDQQQLHELGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFM 1976
            :|.::...|.|:..    .|.:...|.|         ..:.:..:...|....:..||||||.||
 Worm  1038 EHPTLDGQSICIQV----PKTNSTMLRE---------RAATTIQVAYRYRHRKRQAAARKIQNFM 1089

  Fly  1977 RQSRIKLQKERAEKEKLVHQ----RRAEYLQNLQFQGQQ 2011
            ||:|..:..:....:.|:.:    :|..|:...|..|.|
 Worm  1090 RQNRNNVNIDDGHTQHLIAENACAKRRRYVACPQTSGDQ 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CamtaNP_001137624.1 CG-1 422..538 CDD:198144 53/118 (45%)
TIG 1242..1319 CDD:280079 24/78 (31%)
ANK <1405..1497 CDD:238125 24/91 (26%)
ANK repeat 1405..1447 CDD:293786 12/41 (29%)
Ank_2 1410..1500 CDD:289560 24/89 (27%)
ANK repeat 1449..1481 CDD:293786 8/31 (26%)
camt-1NP_494795.2 CG-1 76..195 CDD:198144 54/120 (45%)
IPT 415..499 CDD:238050 27/118 (23%)
ANK 577..>654 CDD:238125 21/79 (27%)
Ank_2 580..>658 CDD:289560 22/80 (28%)
ANK repeat 616..648 CDD:293786 8/31 (26%)
IQ 982..1003 CDD:197470 13/20 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165652
Domainoid 1 1.000 98 1.000 Domainoid score I4527
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 270 1.000 Inparanoid score I1833
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D161424at33208
OrthoFinder 1 1.000 - - FOG0001351
OrthoInspector 1 1.000 - - oto18034
orthoMCL 1 0.900 - - OOG6_105843
Panther 1 1.100 - - LDO PTHR23335
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3337
SonicParanoid 1 1.000 - - X1066
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.020

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