DRSC/TRiP Functional Genomics Resources

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Protein Alignment ced-6 and si:dkey-71h2.2

DIOPT Version :10

Sequence 1:NP_001246225.1 Gene:ced-6 / 35971 FlyBaseID:FBgn0029092 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_005160533.1 Gene:si:dkey-71h2.2 / 572485 ZFINID:ZDB-GENE-041014-145 Length:285 Species:Danio rerio


Alignment Length:184 Identity:53/184 - (28%)
Similarity:89/184 - (48%) Gaps:34/184 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GTGSNSNGDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQ 135
            |...::.|.:|.|..  ..||..|.|.|:.| .|:.||:.|...|.||||.|:...|||::....
Zfish    16 GVPRHTWGTSKHEKL--PENWTDTKETLLEG-MVFNVKYLGMTLVGQPKGEEMAAAAIRRIVTTA 77

  Fly   136 QMKKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQFPLYNISYCADEKGVKKFFSFIAKTVK 200
            :      .:.:||:|:.:|:|.||:.|.:..|:.::....:|.||||..:|...|.|:::::   
Zfish    78 R------ASAKKFRKVTLTVSPKGIIIADTETNDLVEDVSIYRISYCTTDKTQDKVFAYVSQ--- 133

  Fly   201 TQDGSDPTSNGHANGNGDGSAKVEESHECFVFI--SNKLASDITLTIGQAFDLA 252
                                ::..|:.||..|:  ..|:|..:|||:.|||.:|
Zfish   134 --------------------SQFNETLECHAFLCQKKKIAQAVTLTVAQAFKIA 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-6NP_001246225.1 PTB_CED-6 92..261 CDD:269971 47/163 (29%)
si:dkey-71h2.2XP_005160533.1 PTB_LDLRAP-mammal-like 43..165 CDD:269981 42/151 (28%)

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