DRSC/TRiP Functional Genomics Resources

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Protein Alignment ced-6 and CG8312

DIOPT Version :10

Sequence 1:NP_001246225.1 Gene:ced-6 / 35971 FlyBaseID:FBgn0029092 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster


Alignment Length:690 Identity:122/690 - (17%)
Similarity:205/690 - (29%) Gaps:248/690 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TAPTTTMPYQPANSGGTSGGSK--AAAKMAQLKFWNKQNSSK--QQQQDKDKDAADGGN-NTSGG 70
            |..||..|..|...|......|  .:..:|:| ..|..|:.|  :|:|.:....::||. ||..|
  Fly   105 TPATTAAPLPPVPIGTPPRQHKFVKSNSLARL-LGNTYNAKKFEKQEQKRLASGSEGGKFNTYSG 168

  Fly    71 GTG------------SNSNGDAKSEAKN-------------------------GKRNWLHTPEQL 98
            ..|            |..:||...|...                         |:.......:||
  Fly   169 RRGRAGPYLERFKRVSKEDGDVAGEDDTVRVTNVITLTTDSRDLLYGSRQEHVGRTGGYDQNDQL 233

  Fly    99 IS----------------GHAV--------YLVKFFGNLSVDQPK-GIEVVKEAIRKL--QFAQQ 136
            .|                .|:|        :.|.:.||:.....| |...|::.:..|  .:.|.
  Fly   234 TSKAYRTLTRSLGKLWRRTHSVDISTPDPEFKVSYLGNVLTGWAKAGEGCVEKQLNTLWRNYTQH 298

  Fly   137 MKKAETGTQEKFKKLEITIS-IKGVAIQEPRTHKILHQFPLYNISYCADEKGVKKFFSFIAKTVK 200
            .|      .:...:|::..| :|....|...|....|:     |:||...|...:.|.:|.:   
  Fly   299 SK------PDVIMRLKVCASGLKATTRQHGLTEYWAHR-----ITYCCAPKNYPRVFCWIYR--- 349

  Fly   201 TQDGSDPTSNGHANGNGDGSAKVEESHECFVFI--SNKLASDITLTIGQAFDLAYRKYMDSTEKT 263
             .:|                .|::....|...:  ..|:|.||..|:.:..:.|.|::       
  Fly   350 -HEG----------------RKLKHELRCHAVLCSKEKIAQDICDTLRENLESALREF------- 390

  Fly   264 NLSKAQQQINHLQQTVNVYKERLREVSAKLPKAELDALLFNLGIKDILEAPTTEPQNGIEVASEA 328
            ...|..:|...|.....||.      :..||:.::...:.....:..||...:.|:  :....||
  Fly   391 KREKILKQNARLSLANAVYD------NPSLPRRKIMLSVGGNNYRPPLERSKSAPK--LMAIEEA 447

  Fly   329 LSNGKLDDDKLLIDTNS------------------------------TTASTHSASP--SSFLPI 361
            :...:.|:   :.|||.                              .|....|.||  ||.:..
  Fly   448 IGEEEGDE---IEDTNEPEMMPCCQKDSLYPAMTLGRRRCRRGHSIRRTGKIQSFSPCCSSHMAK 509

  Fly   362 VPPRNNLSSQISIGGKSNS----------QKMDELLLNS-------------------------- 390
            ..|:....:..:.|..:|.          .|.|..|.|.                          
  Fly   510 ELPQEETKTMAAAGSSANDGSDSDDFEKLLKFDTTLSNELLPYFDMQLHKNSSQSMVSLSELKEE 574

  Fly   391 -----------DSDSDFDPRAD---ETQEIGGTGRSAISNMFGFEPANSFGQHLFSNNND----- 436
                       :||...||.||   |..::....||.:.         |.|:..|.::.|     
  Fly   575 EGEPLSLLPTINSDPSADPEADYNAEDHDVTAPRRSGVC---------SDGEEDFLDDADDHYFR 630

  Fly   437 ---------------------------HKLQNNNSSLLITSNNNSINSS--GFSSELNITPPLLA 472
                                       |:.|::.||...:|...|.:::  |.|::..:|.|...
  Fly   631 HAAMLTMLHRSSMRKMRAADQTSLKYRHQTQSSISSNASSSTTASTSAAAGGGSAQQGLTSPDSD 695

  Fly   473 PPPKIAAPRRLNSVTTGNGLNGNTDLFGSDPFELNNGPNI 512
            .....:.....::||..|....|:... |||.:|...|::
  Fly   696 EGSISSGCETASTVTNANHEEYNSKRV-SDPGQLEQSPDL 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-6NP_001246225.1 PTB_CED-6 92..261 CDD:269971 36/198 (18%)
CG8312NP_649918.1 PID_2 263..442 CDD:405418 41/224 (18%)

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