DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ced-6 and APPL1

DIOPT Version :10

Sequence 1:NP_001246225.1 Gene:ced-6 / 35971 FlyBaseID:FBgn0029092 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_036228.1 Gene:APPL1 / 26060 HGNCID:24035 Length:709 Species:Homo sapiens


Alignment Length:248 Identity:55/248 - (22%)
Similarity:104/248 - (41%) Gaps:45/248 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 QQQQDKDKDAADGGNNTSGGGTGSNSNGDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSV 115
            :.|..:.|....||..|:..|   .|.|..|||          |.:.::  |.:::|:|.|::.|
Human   463 EDQPGQAKAFGQGGRRTNPFG---ESGGSTKSE----------TEDSIL--HQLFIVRFLGSMEV 512

  Fly   116 DQPKGIEVVKEAIRKLQFAQQMKKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQFPLYNIS 180
            ......:||.|.:|::..|:.:......|:.     .:.::...:.:.:|:|......|||..:.
Human   513 KSDDHPDVVYETMRQILAARAIHNIFRMTES-----HLLVTCDCLKLIDPQTQVTRLTFPLPCVV 572

  Fly   181 YCADEKGVKKFFSFIAKTVKTQDGSDPTSNGHANGNGDGSAKVEESHECFVFISNKLASDITLTI 245
            ..|..:..|:.|.|:.:          ||:|.:..|        .|..|::|.||.....|..::
Human   573 LYATHQENKRLFGFVLR----------TSSGRSESN--------LSSVCYIFESNNEGEKICDSV 619

  Fly   246 GQAFDLAYRKYMD--STEKTN-----LSKAQQQINHLQQTVNVYKERLREVSA 291
            |.|..:|....:|  ::||..     ..|.|:::|..:|.....:|:.|.::|
Human   620 GLAKQIALHAELDRRASEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAA 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-6NP_001246225.1 PTB_CED-6 92..261 CDD:269971 35/170 (21%)
APPL1NP_036228.1 Required for RAB5A binding 1..428
BAR_APPL1 20..234 CDD:153315
BAR-PH_APPL 252..376 CDD:270067
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..434
F&H 403..414
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 467..491 7/26 (27%)
PTB_APPL 490..625 CDD:269980 36/169 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 645..709 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.