DRSC/TRiP Functional Genomics Resources

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Protein Alignment ced-6 and gulp1

DIOPT Version :10

Sequence 1:NP_001246225.1 Gene:ced-6 / 35971 FlyBaseID:FBgn0029092 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_017953118.1 Gene:gulp1 / 100492919 XenbaseID:XB-GENE-968617 Length:305 Species:Xenopus tropicalis


Alignment Length:346 Identity:110/346 - (31%)
Similarity:170/346 - (49%) Gaps:58/346 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 RNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQQMKKAETGTQEKFKKLEI 153
            ::|:||||.|......|..||.|...|:||||.|:|::|:|||:|::.:||:|   .:|..|:|:
 Frog    11 KSWMHTPETLSKHFIAYNAKFLGRTEVEQPKGTEIVRDAVRKLKFSRHIKKSE---GQKTPKVEL 72

  Fly   154 TISIKGVAIQEPRTHKILHQFPLYNISYCADEKGVKKFFSFIAKTVKTQDGSDPTSNGHANGNGD 218
            .|||.||.|.||:|.:|:|...|:.||:|||:|..|:.|:||.|        |..||        
 Frog    73 QISIYGVKILEPKTKEIVHNCQLHRISFCADDKTDKRIFTFICK--------DSESN-------- 121

  Fly   219 GSAKVEESHECFVFISNKLASDITLTIGQAFDLAYRKYMDSTEKTNLSKAQQQINHLQQTVNVYK 283
                   .|.|:||.|.|.|.:|||||||||||||||:::|..|.  .:.::|:..||:.:...:
 Frog   122 -------KHLCYVFDSEKCAEEITLTIGQAFDLAYRKFLESGGKD--VETRKQLAGLQRRIQELE 177

  Fly   284 ERLREVSAKLPKAELDALLFNLGIKD----ILEAPTTEPQNGIEVASEALSNGKLDDDKLLIDTN 344
            ....|:..|:...|...|:.::....    ..::|:|:..:.|..:|              |...
 Frog   178 TENTELKCKVQDLENRLLMTDVSYSPTDSATPQSPSTDIFDMIPFSS--------------ISPE 228

  Fly   345 STTASTHSASPSSFLPIVPPRNNLSSQISIGGKSNSQKMDELLLNS-DSDSDFDPRADETQEIGG 408
            |||.:.:...|    |..|.|::..::..:.|   ::..|.....: |...|...|.||.||...
 Frog   229 STTPTRNGTPP----PPTPIRSDDETKKDLFG---AEPFDPFCCAAGDFPPDIQSRLDEMQEGFK 286

  Fly   409 TGRSAISNMFGFEPANSFGQH 429
            .|.:....:|..:    |..|
 Frog   287 MGLTVEGTIFCLD----FADH 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-6NP_001246225.1 PTB_CED-6 92..261 CDD:269971 76/168 (45%)
gulp1XP_017953118.1 PTB_CED-6 14..157 CDD:269971 76/168 (45%)
ZIP_TSC22D-like 150..191 CDD:424092 9/42 (21%)

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