DRSC/TRiP Functional Genomics Resources

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Protein Alignment ced-6 and gulp1b

DIOPT Version :10

Sequence 1:NP_001246225.1 Gene:ced-6 / 35971 FlyBaseID:FBgn0029092 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_021332702.1 Gene:gulp1b / 100006392 ZFINID:ZDB-GENE-120228-2 Length:404 Species:Danio rerio


Alignment Length:467 Identity:127/467 - (27%)
Similarity:196/467 - (41%) Gaps:145/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQQMKKAETGTQEKFKKLEITIS 156
            :||||.|:..|.||..||.|...||||||.::|:.|:|||:|.:.:||:|   ..|..|:|:.||
Zfish    51 MHTPEALVKSHVVYNAKFLGITEVDQPKGTDMVRVAVRKLKFQRHIKKSE---GHKTPKVELQIS 112

  Fly   157 IKGVAIQEPRTHKILHQFPLYNISYCADEKGVKKFFSFIAKTVKTQDGSDPTSNGHANGNGDGSA 221
            |.||.|.:|:|.::||...|:.:|:|||:|..|:.|:||....:|                    
Zfish   113 IYGVKILDPKTKEMLHNCQLHRMSFCADDKTDKRIFTFICTEPET-------------------- 157

  Fly   222 KVEESHECFVFISNKLASDITLTIGQAFDLAYRKYMDSTEK-----TNLSKAQQQINHLQQTVNV 281
               :.|.|:||.|.|.|.:|||.|||||||||:|:::|..|     ..:...|::|..|:...:.
Zfish   158 ---KKHLCYVFDSEKCAEEITLAIGQAFDLAYKKFLESGGKDVETRKQIGNLQKRIQDLEMENSK 219

  Fly   282 YKERLREVSAKL--PKAELDALLFNLGIKDILEAPTTEPQNGIEVASEALSNGKLDDDKLLIDTN 344
            .|::|:|:..:|  |:....|...:...:|:...      :.:|::|..|               
Zfish   220 LKKKLKELEDQLTDPRCSPRASTLSWCGEDVTSL------SSLEISSVTL--------------- 263

  Fly   345 STTASTHSASPSSFLPIVPPRNNLSSQISIGGKSNSQKMDELLLNSDSDSDFDPRADETQEIGGT 409
             |..|:..:|.|:.|...||..          .::||...:.::..........||..|.     
Zfish   264 -TPVSSPDSSQSASLLTPPPAK----------PTHSQPKSDYIVPRPRTGSIQARAPSTD----- 312

  Fly   410 GRSAISNMFGFEPANSFGQHLFSNNNDHKLQNNNSSLLITSNNNSINSSGFSSELNITPPLLAPP 474
                |.:|..|.|.:...:.|                         |.:||||      |.|.|.
Zfish   313 ----IFDMVPFTPESPITRRL-------------------------NFNGFSS------PYLTPK 342

  Fly   475 PKIAAPRRLNSVTTGNGLNGNTDLFGSDPFE-LNNGPNIFKQN-QLNLDD--------------- 522
                              :.:.||||::||: ...||.:|..: |..||:               
Zfish   343 ------------------DTDIDLFGAEPFDPFICGPTVFTPDMQSKLDEMQRQRWFEGFQMGLT 389

  Fly   523 -----FSLESLD 529
                 ||||.:|
Zfish   390 LEGTVFSLEPVD 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-6NP_001246225.1 PTB_CED-6 92..261 CDD:269971 71/168 (42%)
gulp1bXP_021332702.1 PTB_CED-6 51..194 CDD:269971 71/168 (42%)

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