DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and PKP1

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_012222.1 Gene:PKP1 / 854769 SGDID:S000001304 Length:394 Species:Saccharomyces cerevisiae


Alignment Length:375 Identity:93/375 - (24%)
Similarity:166/375 - (44%) Gaps:42/375 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ASLAKMLDFYSGFNPSPLSIKQFMDFGQNACEKKSYIFLRKELPVRLANIMKE---IALLPDNLL 77
            :::..::..|:....:||:.:.|:.:.....:|:.|:...|.:.:.|:...|.   |..||.|.:
Yeast    39 SNIELLIQDYASKPIAPLNYEYFLQYRPPLTKKEEYMLTIKTINLLLSLTCKRLNAIQRLPYNAV 103

  Fly    78 HTRSVSEVSSWYVKSFEDVLVYEKAEPTHDNLQKFVADLDLIRNRHNDVVQTMAQGVIEMKENEG 142
            ....:...:|.|:||.:.:|........| |..|..|....:.:.|.|.:..:|:|:.|::    
Yeast   104 INPHIERTNSLYLKSLQTLLSIAYPYELH-NPPKIQAKFTELLDDHEDAIVVLAKGLQEIQ---- 163

  Fly   143 GQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGGNP-HAGGRHIGCLDPACDLSDVVRDAY 206
               ....:..|..||:.....||::::|:..:..|...|. ....|.||.|.....::.:::...
Yeast   164 ---SCYPKFQISQFLNFHLKERITMKLLVTHYLSLMAQNKGDTNKRMIGILHRDLPIAQLIKHVS 225

  Fly   207 ENARFLCDQYYLT--SPALEIQQHSSEPGDNLPIRTVYVPSHLYYMLFELFKNSMRAVV----EH 265
            :....:|...:.|  :|.| |...|.:      |....:|..|.|::.|:|||:..|.:    ||
Yeast   226 DYVNDICFVKFNTQRTPVL-IHPPSQD------ITFTCIPPILEYIMTEVFKNAFEAQIALGKEH 283

  Fly   266 HGHDNNDTLPPLKVAICKGKED-ICVKISDQGGGIPRSQTDQLFKYMYSTAPQPS-KSDLHTVP- 327
                     .|:::.:.|..:| :.::|.|.||||.......:|.|.|||..|.| .|:...:| 
Yeast   284 ---------MPIEINLLKPDDDELYLRIRDHGGGITPEVEALMFNYSYSTHTQQSADSESTDLPG 339

  Fly   328 -----LAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEA 372
                 ::|.|:|||:.:.|...|.|.|.:.|..|:|||..|.||..|..|
Yeast   340 EQINNVSGMGFGLPMCKTYLELFGGKIDVQSLLGWGTDVYIKLKGPSKTA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 37/164 (23%)
HATPase_PDK-like 197..366 CDD:340406 50/182 (27%)
PKP1NP_012222.1 BCDHK_Adom3 55..212 CDD:402181 37/164 (23%)
HATPase_PDK-like 216..383 CDD:340406 50/182 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I2523
eggNOG 1 0.900 - - E1_COG0642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I1524
Isobase 1 0.950 - 0 Normalized mean entropy S1736
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 1 1.000 - - oto99041
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R894
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.840

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