DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and pdk2a

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:XP_001332594.3 Gene:pdk2a / 794083 ZFINID:ZDB-GENE-120910-1 Length:409 Species:Danio rerio


Alignment Length:412 Identity:228/412 - (55%)
Similarity:295/412 - (71%) Gaps:15/412 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VRFSAASSSMASLAKMLDFYSGFNPSPLSIKQFMDFGQ-NACEKKSYIFLRKELPVRLANIMKEI 69
            |||...::::|::...::.:|.|:|||||:|||:|||. |||||.|::|||:||||||:||||||
Zfish     4 VRFIMKNAALANVPHHIEHFSKFSPSPLSMKQFLDFGSTNACEKTSFVFLRQELPVRLSNIMKEI 68

  Fly    70 ALLPDNLLHTRSVSEVSSWYVKSFEDVLVY-EKAEPTHDNLQKFVADLDLIRNRHNDVVQTMAQG 133
            .|||..||.|.||..|.|||::|..::|.: ||:...|..|::|||.|..|||||||||.|||||
Zfish    69 NLLPKRLLTTPSVQMVHSWYIQSLMEILEFLEKSPDDHSILEEFVAALVNIRNRHNDVVPTMAQG 133

  Fly   134 VIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGG--NP-HAGGRHIGCLDPA 195
            |||.||..|  .|..|..:|||||||.|:||||||||||||||:|.|  || |.  ..||.:||.
Zfish   134 VIEYKEVFG--QDPVTNQNIQYFLDRFYLSRISIRMLINQHTLVFDGATNPVHP--NTIGSIDPH 194

  Fly   196 CDLSDVVRDAYENARFLCDQYYLTSPALEIQQHSSEPGDNLPIRTVYVPSHLYYMLFELFKNSMR 260
            |.::|||:||||:||.|||||||.||.|::|:.::. ..|.||..||||||||::|||||||:||
Zfish   195 CQVADVVKDAYESARMLCDQYYLNSPDLDLQELNTN-NRNQPISIVYVPSHLYHILFELFKNAMR 258

  Fly   261 AVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTAPQPSKSDLHT 325
            |.:|.|...:|  ||.::|.:..|.||:.:|:||:|||:|..:.:.||.|||||||.|...:...
Zfish   259 ATIESHKEGSN--LPAIQVMVAVGGEDLTIKMSDRGGGVPFRKMENLFSYMYSTAPTPQMDEKQR 321

  Fly   326 VPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFNKTSSKFYRAT 390
            .||||:|||||||||||:||.||:.|.|.||.||||:|:|||||.::.|.||:||||:.:.|..|
Zfish   322 APLAGFGYGLPISRLYAKYFQGDLQLYSMEGHGTDAVIHLKALSTDSVERLPVFNKTARRNYEVT 386

  Fly   391 VPTGDW---SNQSSDMNARQLS 409
            ....||   |.:..|:...:|:
Zfish   387 QGADDWCVPSREPLDLAVFKLA 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 103/165 (62%)
HATPase_PDK-like 197..366 CDD:340406 95/168 (57%)
pdk2aXP_001332594.3 BCDHK_Adom3 30..192 CDD:313630 103/165 (62%)
HATPase_c 242..362 CDD:214643 69/121 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580820
Domainoid 1 1.000 182 1.000 Domainoid score I3390
eggNOG 1 0.900 - - E1_COG0642
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 432 1.000 Inparanoid score I1678
OMA 1 1.010 - - QHG56575
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 1 1.000 - - otm25437
orthoMCL 1 0.900 - - OOG6_100725
Panther 1 1.100 - - LDO PTHR11947
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R894
SonicParanoid 1 1.000 - - X391
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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