DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and pdk3b

DIOPT Version :10

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001074157.1 Gene:pdk3b / 791206 ZFINID:ZDB-GENE-070112-1892 Length:176 Species:Danio rerio


Alignment Length:156 Identity:94/156 - (60%)
Similarity:115/156 - (73%) Gaps:4/156 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LDFYSGFNPSPLSIKQFMDFG-QNACEKKSYIFLRKELPVRLANIMKEIALLPDNLLHTRSVSEV 85
            :::||.|:|||:|||||:||| :|||||.||:||||||.|||||.|:|:.||||:|....||..|
Zfish    15 IEYYSRFSPSPMSIKQFLDFGRENACEKTSYMFLRKELAVRLANTMREVTLLPDSLQIQPSVKLV 79

  Fly    86 SSWYVKSFEDVLVYEKAEPTHDN-LQKFVADLDLIRNRHNDVVQTMAQGVIEMKENEGGQVDAPT 149
            .|||.:|||::|.:||..|...: |..|:..|..|||||||||.||||||||.||..|  .|...
Zfish    80 ESWYSQSFEELLKFEKRSPEDPHTLNDFLEMLIKIRNRHNDVVPTMAQGVIEYKEKFG--FDPFI 142

  Fly   150 ESSIQYFLDRLYMSRISIRMLINQHT 175
            .|::||||||.|.:|||.|||||||:
Zfish   143 SSNVQYFLDRFYTNRISFRMLINQHS 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:463093 89/146 (61%)
HATPase_PDK-like 197..366 CDD:340406
pdk3bNP_001074157.1 BCDHK_Adom3 25..167 CDD:463093 87/143 (61%)
Blue background indicates that the domain is not in the aligned region.

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