DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdk and pdk4

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001122176.1 Gene:pdk4 / 561007 ZFINID:ZDB-GENE-060503-754 Length:409 Species:Danio rerio


Alignment Length:396 Identity:223/396 - (56%)
Similarity:287/396 - (72%) Gaps:12/396 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SSSMASLAKMLDFYSGFNPSPLSIKQFMDFGQ-NACEKKSYIFLRKELPVRLANIMKEIALLPDN 75
            :||..::.|.:|.:|.|:|||||:|||:|||. |||||.|::|||:|||||||||||||..|||.
Zfish    10 NSSKLNIPKQVDRFSKFSPSPLSMKQFIDFGSANACEKTSFMFLRQELPVRLANIMKEIDFLPDK 74

  Fly    76 LLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDN-LQKFVADLDLIRNRHNDVVQTMAQGVIEMKE 139
            ||.|.|:..:.|||.:|..:::.:.:.:|.... |.||...|..:|||||:||.||||||:|.||
Zfish    75 LLGTPSLKLLQSWYAQSLMELVDFLEKDPDDKKILTKFTETLINVRNRHNNVVPTMAQGVLEYKE 139

  Fly   140 NEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGG--NPHAGGRHIGCLDPACDLSDVV 202
            ..|  ||..|..::||||||.||||||.|||:|||||:|.|  || |..:|||.:||.||:.:||
Zfish   140 AFG--VDPVTNQNVQYFLDRFYMSRISTRMLMNQHTLIFDGSTNP-AHPKHIGSIDPNCDVVEVV 201

  Fly   203 RDAYENARFLCDQYYLTSPALEIQQ-HSSEPGDNLPIRTVYVPSHLYYMLFELFKNSMRAVVEHH 266
            |||||:::.||||||||||.:||:| :...|.|  ||..||||||||:||||||||:|||.||  
Zfish   202 RDAYESSKMLCDQYYLTSPEVEIKQVNIKGPSD--PIHIVYVPSHLYHMLFELFKNAMRATVE-- 262

  Fly   267 GHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTAPQPSKSDLHTVPLAGY 331
            .|:.:..|||:||.:..|.||:.:|:||:|.|:|..:.::||.|||||||.|...|....||||:
Zfish   263 THETSLHLPPIKVRVSLGTEDLTIKMSDRGSGVPLRKIERLFSYMYSTAPSPVAEDTRNAPLAGF 327

  Fly   332 GYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFNKTSSKFYRATVPTGDW 396
            |||||||||||:||.||:.|.|.||:||.|:|||||||.|:.|.||:|||::.:.|:.:....||
Zfish   328 GYGLPISRLYAKYFQGDLQLYSMEGYGTSAVIYLKALSTESIERLPVFNKSALRHYQTSTEADDW 392

  Fly   397 SNQSSD 402
            ...||:
Zfish   393 CIPSSE 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 95/164 (58%)
HATPase_PDK-like 197..366 CDD:340406 100/169 (59%)
pdk4NP_001122176.1 BCDHK_Adom3 30..192 CDD:287417 95/164 (58%)
BaeS <196..370 CDD:223715 106/177 (60%)
HATPase_c 242..362 CDD:214643 72/121 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580816
Domainoid 1 1.000 182 1.000 Domainoid score I3390
eggNOG 1 0.900 - - E1_COG0642
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 432 1.000 Inparanoid score I1678
OMA 1 1.010 - - QHG56575
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 1 1.000 - - otm25437
orthoMCL 1 0.900 - - OOG6_100725
Panther 1 1.100 - - O PTHR11947
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X391
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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