DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and pdk4

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001006803.1 Gene:pdk4 / 448511 XenbaseID:XB-GENE-491645 Length:404 Species:Xenopus tropicalis


Alignment Length:400 Identity:223/400 - (55%)
Similarity:287/400 - (71%) Gaps:10/400 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RFSAASSSMASLAKMLDFYSGFNPSPLSIKQFMDFGQ-NACEKKSYIFLRKELPVRLANIMKEIA 70
            ||...::::|:..|.::.:|.|:|||||:|||:|||. |.|||.|:.|||:||||||||||:|:.
 Frog     5 RFLLKNAALANAPKQIERFSRFSPSPLSMKQFIDFGSANGCEKTSFAFLRQELPVRLANIMRELY 69

  Fly    71 LLPDNLLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDN-LQKFVADLDLIRNRHNDVVQTMAQGV 134
            :|||.||.|.||..|.|||::|..:::.:.:..|.... |..|...|..||||||:||.||||||
 Frog    70 ILPDQLLGTPSVQLVQSWYIQSLMELIEFVERNPEDQRVLSDFTEALVTIRNRHNNVVPTMAQGV 134

  Fly   135 IEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLF-GGNPHAGGRHIGCLDPACDL 198
            ||.||..|  ||..|..::||||||.|||||||||||||||||| ||...|..:|||.:||.||:
 Frog   135 IEYKEAFG--VDPVTNQNVQYFLDRFYMSRISIRMLINQHTLLFDGGTNPAHPKHIGSIDPNCDV 197

  Fly   199 SDVVRDAYENARFLCDQYYLTSPALEIQQ-HSSEPGDNLPIRTVYVPSHLYYMLFELFKNSMRAV 262
            .:||.||::.|:.||:||||.||.|.|:| :..:|  ..||..||||||||:||||||||:|||.
 Frog   198 VEVVHDAFDTAKMLCEQYYLASPKLIIRQANGKDP--TQPIHIVYVPSHLYHMLFELFKNAMRAT 260

  Fly   263 VEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTAPQPSKSDLHTVP 327
            :|:  |:.:..|||::|.:..|.||:.:||||.|||:|..:.::||.|||||||:|...:....|
 Frog   261 IEN--HETSSHLPPVEVNVVLGNEDLTIKISDNGGGVPLRKIERLFSYMYSTAPRPLMDNSRNAP 323

  Fly   328 LAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFNKTSSKFYRATVP 392
            |||:||||||||||||||.||::|.|.|||||||:|||||||.|:.|.||:|||::.|.|:....
 Frog   324 LAGFGYGLPISRLYARYFQGDLMLQSMEGFGTDAVIYLKALSTESVERLPVFNKSAWKHYKFCTE 388

  Fly   393 TGDWSNQSSD 402
            ..||...||:
 Frog   389 ADDWCIPSSE 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 97/163 (60%)
HATPase_PDK-like 197..366 CDD:340406 97/169 (57%)
pdk4NP_001006803.1 BCDHK_Adom3 30..192 CDD:371050 97/163 (60%)
HATPase_PDK-like 196..362 CDD:340406 97/169 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 185 1.000 Domainoid score I3319
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 439 1.000 Inparanoid score I1628
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 1 1.000 - - otm47583
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R894
SonicParanoid 1 1.000 - - X391
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.090

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