DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdk and Pdk3

DIOPT Version :10

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001100051.1 Gene:Pdk3 / 296849 RGDID:1593276 Length:415 Species:Rattus norvegicus


Alignment Length:412 Identity:238/412 - (57%)
Similarity:292/412 - (70%) Gaps:27/412 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLF------PVRFSAASSSMASLAKMLDFYSGFNPSPLSIKQFMDFGQ-NACEKKSYIFLRKEL 58
            ||||      ||            .|.::.||.|:|||||||||:|||: |||||.||:||||||
  Rat     1 MRLFYRLLKQPV------------PKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKEL 53

  Fly    59 PVRLANIMKEIALLPDNLLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDN-LQKFVADLDLIRNR 122
            ||||||.|:|:.|||||||:..||..|.|||::||.::|.||...|.... |..|:..|..||||
  Rat    54 PVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPRVLDNFLHVLINIRNR 118

  Fly   123 HNDVVQTMAQGVIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGG--NPHAG 185
            |||||.||||||||.||..|  .|....|:|||||||.|.:|||.|||||||||||||  || |.
  Rat   119 HNDVVPTMAQGVIEYKEKFG--FDPFISSNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNP-AH 180

  Fly   186 GRHIGCLDPACDLSDVVRDAYENARFLCDQYYLTSPALEIQQHSSEPGDNLPIRTVYVPSHLYYM 250
            .:|||.:||.|:::|||:||||.|:.||:||||.:|.||:::.::: ..|.||:.|||||||::|
  Rat   181 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAK-APNKPIQVVYVPSHLFHM 244

  Fly   251 LFELFKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTA 315
            |||||||||||.||.: .|..:..|.:|..:..||||:.:||||.|||:|..:.|:||.||||||
  Rat   245 LFELFKNSMRATVELY-EDKKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA 308

  Fly   316 PQPSKSDLHTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFN 380
            |:||.......||||:||||||||||||||.||:.|.|.||.||||:|||||||.|:.|.||:||
  Rat   309 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFN 373

  Fly   381 KTSSKFYRATVPTGDWSNQSSD 402
            |::.:.|:.|....||||.||:
  Rat   374 KSAWRHYKTTPEADDWSNPSSE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:463093 105/164 (64%)
HATPase_PDK-like 197..366 CDD:340406 98/168 (58%)
Pdk3NP_001100051.1 BCDHK_Adom3 26..188 CDD:463093 105/164 (64%)
HATPase_PDK-like 192..359 CDD:340406 98/168 (58%)

Return to query results.
Submit another query.