DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and Bckdk

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_062117.2 Gene:Bckdk / 29603 RGDID:2198 Length:412 Species:Rattus norvegicus


Alignment Length:335 Identity:100/335 - (29%)
Similarity:164/335 - (48%) Gaps:41/335 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KSYIFLRKELPVRLANIMKEIALLPDNLLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDNLQKFV 113
            ||..:|::|||||:|:.:|....||..:....::..|...|:::|:.:..:...:...|..|.  
  Rat    89 KSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQY-- 151

  Fly   114 ADLDLIR---NRHNDVVQTMAQGVIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHT 175
              ..|:|   :.|.|||..:|:|:.|.:::      ...|..::||||:...||:.||||...|.
  Rat   152 --CQLVRQLLDDHKDVVTLLAEGLRESRKH------IEDEKLVRYFLDKTLTSRLGIRMLATHHL 208

  Fly   176 LLFGGNPHAGGRHIGCLDPACDLSDVVRDAYENARFLCDQYYLTSPALEIQQHSSEPGDNLPIRT 240
            .|....|.    .:|.:........::....:.||.||:..|..:|.:.|..|       :..|.
  Rat   209 ALHEDKPD----FVGIIC
TRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGH-------VAARF 262

  Fly   241 VYVPSHLYYMLFELFKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTD 305
            .::|..|.|:|.||.||:|||.:|.| .|....:|.:.:.|.....|:.::|||:||||.....|
  Rat   263 PFIPMPLDYILPELLKNAMRATMESH-LDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLD 326

  Fly   306 QLFKYMYSTAPQPSKS----------DLH----TVPLAGYGYGLPISRLYARYFHGDIVLLSCEG 356
            ::..|.::||...::.          |:|    :.|:.|:|:|||.||.||.|..|.:.|.|.:|
  Rat   327 RVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391

  Fly   357 FGTDAIIYLK 366
            .|||  :||:
  Rat   392 IGTD--VYLR 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 41/146 (28%)
HATPase_PDK-like 197..366 CDD:340406 58/182 (32%)
BckdkNP_062117.2 BCDHK_Adom3 69..222 CDD:402181 41/146 (28%)
HATPase_PDK-like 226..401 CDD:340406 59/184 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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