DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and bckdk

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_998225.2 Gene:bckdk / 282677 ZFINID:ZDB-GENE-021204-1 Length:428 Species:Danio rerio


Alignment Length:378 Identity:117/378 - (30%)
Similarity:176/378 - (46%) Gaps:62/378 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ASSSMASL----AKMLDFYSGFNPSPLSIKQFMDFGQNACEKKSYIFLRKELPVRLANIMKEIAL 71
            ||:...|:    |.||  |:|.:|.          ||:......|  |.||||||:|:.:|....
Zfish    78 ASAEKPSVRLTPATML--YAGKSPD----------GQHILSSARY--LHKELPVRIAHRIKGFRS 128

  Fly    72 LPDNLLHTRSVSEVSSWYVKSFE-----DVLVYEKAEPTHDNLQKFVADLDLIRNRHNDVVQTMA 131
            ||..:....::.:|...|::::.     ..:..::.|..:..:.|.:.|      .|.|||..:|
Zfish   129 LPFIIGCNPTILQVHELYIRAYHMLSDFPAIQDQETEARYSKMVKQLLD------DHKDVVTMLA 187

  Fly   132 QGVIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGGNPHAGGRHIGCLDPAC 196
            :|..|.:::      ...|..::.|||....||:.||||...|..|...||...|.....|.|  
Zfish   188 EGFRECRKH------ILDEMLVRNFLDTTLTSRLGIRMLATHHIALHEDNPDFVGIICRRLSP-- 244

  Fly   197 DLSDVVRDAYENARFLCDQYYLTSPALEIQQHSSEPGDNLPIRTVYVPSHLYYMLFELFKNSMRA 261
              ..::....:.||.||:..|..||.:.|..|       :..|..::|..|.|:|.||.||:|||
Zfish   245 --KKIIEKWVDFARRLCEHQYGNSPRVRINGH-------VAARFPFIPLPLDYILPELLKNAMRA 300

  Fly   262 VVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTAPQ----PSKSD 322
            .:|.| .|....:|.:.|.|.....|..::|||:|||||.|..|::..|.:|||.|    |..|:
Zfish   301 TMESH-LDTPYNVPDVVVTIANNDTDFVIRISDRGGGIPHSILDKVMHYHFSTAEQSAQDPRMSN 364

  Fly   323 L---------HTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLK 366
            |         .:.|:.|:|:|||.||.||.|..|.:.:.|.:|.|||  :||:
Zfish   365 LFDSMTNSGPQSGPMHGFGFGLPTSRAYAEYLGGSLAIQSMQGIGTD--VYLR 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 41/165 (25%)
HATPase_PDK-like 197..366 CDD:340406 64/181 (35%)
bckdkNP_998225.2 BCDHK_Adom3 86..239 CDD:287417 47/178 (26%)
BaeS <247..416 CDD:223715 65/179 (36%)
HATPase_c 283..417 CDD:214643 55/136 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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