DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdk and Pdk3

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_663605.1 Gene:Pdk3 / 236900 MGIID:2384308 Length:415 Species:Mus musculus


Alignment Length:412 Identity:239/412 - (58%)
Similarity:292/412 - (70%) Gaps:27/412 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLF------PVRFSAASSSMASLAKMLDFYSGFNPSPLSIKQFMDFGQ-NACEKKSYIFLRKEL 58
            ||||      ||            .|.::.||.|:|||||||||:|||: |||||.||:||||||
Mouse     1 MRLFYRLLKQPV------------PKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKEL 53

  Fly    59 PVRLANIMKEIALLPDNLLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDN-LQKFVADLDLIRNR 122
            ||||||.|:|:.|||||||:..||..|.|||::||.::|.||...|.... |..|:..|..||||
Mouse    54 PVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPRVLDNFLNVLINIRNR 118

  Fly   123 HNDVVQTMAQGVIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGG--NPHAG 185
            |||||.||||||||.||..|  .|....|:|||||||.|.:|||.|||||||||||||  || |.
Mouse   119 HNDVVPTMAQGVIEYKEKFG--FDPFISSNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNP-AH 180

  Fly   186 GRHIGCLDPACDLSDVVRDAYENARFLCDQYYLTSPALEIQQHSSEPGDNLPIRTVYVPSHLYYM 250
            .:|||.:||.|:::|||:||||.|:.||:||||.:|.||:::.::: ..|.||:.|||||||::|
Mouse   181 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAK-APNKPIQVVYVPSHLFHM 244

  Fly   251 LFELFKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTA 315
            |||||||||||.||.| .|..:..|.:|..:..||||:.:||||.|||:|..:.|:||.||||||
Mouse   245 LFELFKNSMRATVELH-EDKKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA 308

  Fly   316 PQPSKSDLHTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFN 380
            |:||.......||||:||||||||||||||.||:.|.|.||.||||:|||||||.|:.|.||:||
Mouse   309 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFN 373

  Fly   381 KTSSKFYRATVPTGDWSNQSSD 402
            |::.:.|:.|....||||.||:
Mouse   374 KSAWRHYKTTPEADDWSNPSSE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 105/164 (64%)
HATPase_PDK-like 197..366 CDD:340406 99/168 (59%)
Pdk3NP_663605.1 BCDHK_Adom3 26..188 CDD:287417 105/164 (64%)
BaeS <220..365 CDD:223715 87/146 (60%)
HATPase_c 238..359 CDD:214643 76/121 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..415 7/13 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837223
Domainoid 1 1.000 183 1.000 Domainoid score I3418
eggNOG 1 0.900 - - E1_COG0642
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55897
Inparanoid 1 1.050 444 1.000 Inparanoid score I1626
Isobase 1 0.950 - 0 Normalized mean entropy S1736
OMA 1 1.010 - - QHG56575
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 1 1.000 - - otm42480
orthoMCL 1 0.900 - - OOG6_100725
Panther 1 1.100 - - O PTHR11947
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R894
SonicParanoid 1 1.000 - - X391
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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