DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and pdhk-2

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_498928.1 Gene:pdhk-2 / 176226 WormBaseID:WBGene00022719 Length:401 Species:Caenorhabditis elegans


Alignment Length:396 Identity:210/396 - (53%)
Similarity:284/396 - (71%) Gaps:10/396 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VRFS--AASSSMASLAKMLDFYSGFNPSPLSIKQFMDFGQNACEKKSYIFLRKELPVRLANIMKE 68
            :|||  .....:.||||.||:||.|.||.|:|:|::|||:......||.||:.||.|||||||:|
 Worm     1 MRFSRKLLGPFVGSLAKKLDYYSQFQPSSLTIQQYLDFGRIGTSANSYTFLKNELLVRLANIMQE 65

  Fly    69 IALLPDNLLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDNLQKFVADLDLIRNRHNDVVQTMAQG 133
            ..|||..||...|...||:||.:||||:|::|.::.:.:.:.:|...|.::..||..||:|||:|
 Worm    66 FTLLPPKLLQMPSSKMVSNWYAESFEDLLLFEASDSSPEQVARFNDQLTVVLKRHAHVVETMAEG 130

  Fly   134 VIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGGNPHAGGRHIGCLDPACDL 198
            :||::|::|  ||..:|..|||||||.|::|||||||.|||.::||.......||:||:|||||:
 Worm   131 LIELRESDG--VDIASEKGIQYFLDRFYINRISIRMLQNQHLVVFGNVLPESPRHVGCIDPACDV 193

  Fly   199 SDVVRDAYENARFLCDQYYLTSPALEIQQHSS-EPGDNLPIRTVYVPSHLYYMLFELFKNSMRAV 262
            ..||.||:||||||||:||||||:::::.|:: |.|.  ||..|.||||||:|:||||||:|||.
 Worm   194 ESVVYDAFENARFLCDRYYLTSPSMKLEMHNAVEKGK--PISIVAVPSHLYHMMFELFKNAMRAT 256

  Fly   263 VEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTAPQPSKSDLHTVP 327
            ||:||.|  |.||.:||.:.||:||:.:||.|:|||:.|:..::|:.|||||||.|.: |....|
 Worm   257 VEYHGVD--DDLPDIKVYVVKGQEDLSIKICDRGGGVSRTILERLYNYMYSTAPPPPR-DGTQAP 318

  Fly   328 LAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFNKTSSKFYRATVP 392
            |||||||||:||||||||.||:.|:|.||.||||.|||||:..||:|:|||::.:|.:.......
 Worm   319 LAGYGYGLPLSRLYARYFLGDLFLVSMEGHGTDACIYLKAVPVEASEVLPIYSTSSRRNLTMGPQ 383

  Fly   393 TGDWSN 398
            ..|||:
 Worm   384 VADWSH 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 77/160 (48%)
HATPase_PDK-like 197..366 CDD:340406 102/169 (60%)
pdhk-2NP_498928.1 BCDHK_Adom3 30..188 CDD:287417 77/159 (48%)
BaeS <226..365 CDD:223715 87/143 (61%)
HATPase_c 238..357 CDD:214643 76/121 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159410
Domainoid 1 1.000 160 1.000 Domainoid score I2482
eggNOG 1 0.900 - - E1_COG0642
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55897
Inparanoid 1 1.050 411 1.000 Inparanoid score I1049
Isobase 1 0.950 - 0 Normalized mean entropy S1736
OMA 1 1.010 - - QHG56575
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 1 1.000 - - oto17577
orthoMCL 1 0.900 - - OOG6_100725
Panther 1 1.100 - - LDO PTHR11947
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R894
SonicParanoid 1 1.000 - - X391
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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