DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdk and Bckdk

DIOPT Version :9

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_033869.1 Gene:Bckdk / 12041 MGIID:1276121 Length:412 Species:Mus musculus


Alignment Length:335 Identity:100/335 - (29%)
Similarity:164/335 - (48%) Gaps:41/335 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KSYIFLRKELPVRLANIMKEIALLPDNLLHTRSVSEVSSWYVKSFEDVLVYEKAEPTHDNLQKFV 113
            ||..:|::|||||:|:.:|....||..:....::..|...|:::|:.:..:...:...|..|.  
Mouse    89 KSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQY-- 151

  Fly   114 ADLDLIR---NRHNDVVQTMAQGVIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHT 175
              ..|:|   :.|.|||..:|:|:.|.:::      ...|..::||||:...||:.||||...|.
Mouse   152 --CQLVRQLLDDHKDVVTLLAEGLRESRKH------IQDEKLVRYFLDKTLTSRLGIRMLATHHL 208

  Fly   176 LLFGGNPHAGGRHIGCLDPACDLSDVVRDAYENARFLCDQYYLTSPALEIQQHSSEPGDNLPIRT 240
            .|....|.    .:|.:........::....:.||.||:..|..:|.:.|..|       :..|.
Mouse   209 ALHEDKPD----FVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGH-------VAARF 262

  Fly   241 VYVPSHLYYMLFELFKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTD 305
            .::|..|.|:|.||.||:|||.:|.| .|....:|.:.:.|.....|:.::|||:||||.....|
Mouse   263 PFIPMPLDYILPELLKNAMRATMESH-LDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLD 326

  Fly   306 QLFKYMYSTAPQPSKS----------DLH----TVPLAGYGYGLPISRLYARYFHGDIVLLSCEG 356
            ::..|.::||...::.          |:|    :.|:.|:|:|||.||.||.|..|.:.|.|.:|
Mouse   327 RVMDYHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391

  Fly   357 FGTDAIIYLK 366
            .|||  :||:
Mouse   392 IGTD--VYLR 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:402181 41/146 (28%)
HATPase_PDK-like 197..366 CDD:340406 58/182 (32%)
BckdkNP_033869.1 BCDHK_Adom3 69..222 CDD:287417 41/146 (28%)
BaeS <154..400 CDD:223715 83/266 (31%)
HATPase_c 266..401 CDD:214643 50/137 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1242599at2759
OrthoFinder 1 1.000 - - FOG0000382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.