DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdk and Pdk1

DIOPT Version :10

Sequence 1:NP_001097240.1 Gene:Pdk / 35970 FlyBaseID:FBgn0017558 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_446278.2 Gene:Pdk1 / 116551 RGDID:69427 Length:434 Species:Rattus norvegicus


Alignment Length:405 Identity:226/405 - (55%)
Similarity:294/405 - (72%) Gaps:16/405 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SAASSSMAS---LAKMLDFYSGFNPSPLSIKQFMDFGQ-NACEKKSYIFLRKELPVRLANIMKEI 69
            ||:.|..||   :...:|||:.|:|||||:|||:|||. |||||.|::|||:|||||||||||||
  Rat    30 SASGSGPASESGVPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEI 94

  Fly    70 ALLPDNLLHTRSVSEVSSWYVKSFEDVLVY-EKAEPTHDNLQKFVADLDLIRNRHNDVVQTMAQG 133
            :|||||||.|.||..|.|||::|.:::|.: :|:......:.:|...:..||||||||:.|||||
  Rat    95 SLLPDNLLRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKTIYEFTDTVIRIRNRHNDVIPTMAQG 159

  Fly   134 VIEMKENEGGQVDAPTESSIQYFLDRLYMSRISIRMLINQHTLLFGGNPHAGGR-HIGCLDPACD 197
            |.|.||:.|  ||..|..::||||||.||||||||||:|||:|||||......| |||.::|.||
  Rat   160 VTEYKESFG--VDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGSPSHRKHIGSINPNCD 222

  Fly   198 LSDVVRDAYENARFLCDQYYLTSPALEIQQ-HSSEPGDNLPIRTVYVPSHLYYMLFELFKNSMRA 261
            :.:|::|.|||||.|||.||:.||.||::: ::..||.  ||:.||||||||:|:||||||:|||
  Rat   223 VVEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQ--PIQVVYVPSHLYHMVFELFKNAMRA 285

  Fly   262 VVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFKYMYSTAPQPSKSDLHTV 326
            .:|||.  :....||::|.:..|:||:.||:||:|||:|..:.|:||.|||||||:|.......|
  Rat   286 TMEHHA--DKGVYPPIQVHVTLGEEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAV 348

  Fly   327 PLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAIIYLKALSDEANELLPIFNKTSSKFYRATV 391
            ||||:|||||||||||:||.||:.|.|.||:||||:||:||||.|:.|.||::||.:.|.||...
  Rat   349 PLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTESIERLPVYNKAAWKHYRTNH 413

  Fly   392 PTGDW---SNQSSDM 403
            ...||   |.:..||
  Rat   414 EADDWCVPSREPKDM 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdkNP_001097240.1 BCDHK_Adom3 32..193 CDD:463093 98/163 (60%)
HATPase_PDK-like 197..366 CDD:340406 97/169 (57%)
Pdk1NP_446278.2 BCDHK_Adom3 56..218 CDD:463093 98/163 (60%)
HATPase_PDK-like 222..388 CDD:340406 97/169 (57%)

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