DRSC/TRiP Functional Genomics Resources

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Protein Alignment prel and UPS1

DIOPT Version :9

Sequence 1:NP_001260824.1 Gene:prel / 35969 FlyBaseID:FBgn0033413 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_013294.1 Gene:UPS1 / 850890 SGDID:S000004183 Length:175 Species:Saccharomyces cerevisiae


Alignment Length:161 Identity:59/161 - (36%)
Similarity:89/161 - (55%) Gaps:10/161 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREV-RDGKLFSRRLLSKTNPVPKWGARFYNNV- 75
            :|...:.:|..|::||||||.|.|||:.|||.|.| ::|.|.:.|||.|:..:|.|...|...: 
Yeast    10 IFPTDFASVSRAFFNRYPNPYSPHVLSIDTISRNVDQEGNLRTTRLLKKSGKLPTWVKPFLRGIT 74

  Fly    76 PVKIVEDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVVYS-EQKDGSTLAVRRAYISSQVFGFSRA 139
            ...|:|.||::|...|..|:||||..|.||||:|...|. :....||:|..|...||   ||:..
Yeast    75 ETWIIEVSVVNPANSTMKTYTRNLDHTGIMKVEEYTTYQFDSATSSTIADSRVKFSS---GFNMG 136

  Fly   140 IRA----FGIERFKANGNKASNGFNYVLRRM 166
            |::    :...:|..|..|:..|..:|::::
Yeast   137 IKSKVEDWSRTKFDENVKKSRMGMAFVIQKL 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prelNP_001260824.1 PRELI 21..164 CDD:282550 58/149 (39%)
UPS1NP_013294.1 PRELI 16..170 CDD:398400 58/155 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341992
Domainoid 1 1.000 89 1.000 Domainoid score I1812
eggNOG 1 0.900 - - E1_KOG3337
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40859
Inparanoid 1 1.050 91 1.000 Inparanoid score I1532
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52842
OrthoFinder 1 1.000 - - FOG0004716
OrthoInspector 1 1.000 - - oto99386
orthoMCL 1 0.900 - - OOG6_104463
Panther 1 1.100 - - LDO PTHR11158
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1608
SonicParanoid 1 1.000 - - X2787
TreeFam 1 0.960 - -
1514.790

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