DRSC/TRiP Functional Genomics Resources

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Protein Alignment prel and slmo

DIOPT Version :10

Sequence 1:NP_610487.3 Gene:prel / 35969 FlyBaseID:FBgn0033413 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_524705.1 Gene:slmo / 44132 FlyBaseID:FBgn0029161 Length:215 Species:Drosophila melanogaster


Alignment Length:228 Identity:50/228 - (21%)
Similarity:88/228 - (38%) Gaps:22/228 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TETVFDYSWMNVVVAYWNRYPNPSSTHVLTEDTIQREVRDGKLFSRRLLSKTNPVPKWGARFYNN 74
            :|.:|::.|..|..|.|.:||||.:..::..|.::|.|.||.|.:.||:......|||.......
  Fly     6 SEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYFPKWTHALIGT 70

  Fly    75 VPVKIV-EDSVLDPVKKTFTTFTRNLGMTKIMKVDEIVVYSEQKDGSTLAVRRAYISSQVFG--F 136
            ...... |.|.:||.:|.....|.||...:.:.|||::.|......::..:.:...:..|||  .
  Fly    71 AKTCFASERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPL 135

  Fly   137 SRAIRAFGIERFKANGNKASNGFNYVLRRMFPDSLVGGGHHQHAVTTTSPAGELPATTITVSTTN 201
            |..:..........|..|...|..:|:                .:..|...|....|...:..|.
  Fly   136 SHYMEDLLTSTISTNAGKGRQGLEWVI----------------GLINTEVKGIARGTDELLHNTR 184

  Fly   202 GSLNNQGALKSAAKVGYEFFKSHASKIAQLFSV 234
            .|::.   :..:|:...:...:.|:|.|:...:
  Fly   185 RSIDE---VTESARKSMDEISAQAAKAAKAMHI 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prelNP_610487.3 PRELI 21..164 CDD:398400 38/145 (26%)
slmoNP_524705.1 PRELI 15..168 CDD:398400 38/168 (23%)

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