DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13955 and tchp

DIOPT Version :9

Sequence 1:NP_610486.1 Gene:CG13955 / 35968 FlyBaseID:FBgn0033412 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001035433.1 Gene:tchp / 678595 ZFINID:ZDB-GENE-060421-3368 Length:499 Species:Danio rerio


Alignment Length:373 Identity:92/373 - (24%)
Similarity:166/373 - (44%) Gaps:98/373 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFLTRTD---------RRNLKSQI--------SFQVAQKMHEWHADLDNRRWNLCLLLQKEALEA 52
            :.:.:||         |:||..::        :.|:.:...|.|.|....:|.   :.|:|..:|
Zfish   116 QLVEKTDALRSAREERRKNLAQELLREHWKQNNSQLRKVESELHKDHIVSQWQ---VQQQEKKQA 177

  Fly    53 DEQIAEMLQAQADEADRKRHEWIEMERLKREE----------AEMELVKVKKQQREIENSEAHRH 107
            ||:..|..|...:|.:|.|.|  .:||:::||          || ||:| :.::.::...||.|.
Zfish   178 DERTQEEKQRFENEYERTRQE--ALERMRKEEENRKWEEKKRAE-ELLK-QMEELKLREQEAERL 238

  Fly   108 MLTKEILLESKQAQLHQIEEKKAL---KRRQACVEILWQRVWQRLDESKAQQEQHELK-----LR 164
            ...:|.|: ||:.:|.::|:::.:   .||:........|.::...:.:|||.|.||:     |.
Zfish   239 KQEQETLM-SKRWELEKLEDERKMMEESRRKTEFGRFLTRQYRAQLKRRAQQVQEELEADRKILA 302

  Fly   165 NLIENRCQAHNLDTDREQKAQ---------FAKEVLADQRECSQALELAAEMDVLKKQEDLKKLK 220
            .|:|.     .||..|..||:         :.|.|:.:|.:..:  |..||.|:|.: |:.:::.
Zfish   303 ALLEG-----ELDEQRFHKARRERAVADAAWMKRVIEEQLQLER--EREAEFDILYR-EEAQRVW 359

  Fly   221 DKR----------RQQLI---------DLQDQIKWNLTISARQAQANIREDVGYNILEDR---QI 263
            :||          |::|:         .||::::.|..  ||:.....||::...:.:||   ::
Zfish   360 EKREAEWEKERRARERLMREVLAGRQQQLQERMQENRL--AREESLQRREELLQQLEQDRLTLRL 422

  Fly   264 YEELME-KRCARIHNRD----------WHQQYMTHTAAERAARREEDL 300
            .:|..| .|.|||...|          |.||   .|..:..|:..|:|
Zfish   423 EKEQQEGLRTARIQEIDNQVEQRRKEQWEQQ---QTLEQEEAQEREEL 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13955NP_610486.1 None
tchpNP_001035433.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..78
Interaction with keratin proteins. /evidence=ECO:0000250|UniProtKB:Q9BT92 74..499 92/373 (25%)
TPH 151..484 CDD:290579 86/338 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..209 15/41 (37%)
Trichohyalin/plectin homology domain. /evidence=ECO:0000250|UniProtKB:Q9BT92 260..426 39/175 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.