DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wun and plpp1

DIOPT Version :9

Sequence 1:NP_724787.1 Gene:wun / 35966 FlyBaseID:FBgn0016078 Length:379 Species:Drosophila melanogaster
Sequence 2:XP_012816123.1 Gene:plpp1 / 496488 XenbaseID:XB-GENE-958883 Length:284 Species:Xenopus tropicalis


Alignment Length:264 Identity:115/264 - (43%)
Similarity:167/264 - (63%) Gaps:25/264 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LDVLILLCAGFPI-LLFFLLGEPYKRGFFCDDESLKHPFHDSTVRNWMLYFIGAVIPVGVIFIVE 155
            ||::.::.|..|: :|..:..:||:|||||||:|:|:|||||||.:.:||.:|..:|:..:.:.|
 Frog    12 LDIVCVVLAALPLGVLKLITKKPYQRGFFCDDDSIKYPFHDSTVTSTVLYAVGFTVPICSMILGE 76

  Fly   156 VI-ISQNKAKQDNGNATSRRYVFMNYELPDWMIECYKKIGIYAFGAVLSQLTTDIAKYSIGRLRP 219
            .: :..|..:       |..::..||     :...||.||.:.|||.:||..||||||:||||||
 Frog    77 TLSVFYNDLR-------SSAFIRNNY-----VATIYKAIGTFIFGAAVSQSLTDIAKYTIGRLRP 129

  Fly   220 HFIAVCQPQMADGSTCDDAINAG-KYIQEFTCKGVGSSARMLKEMRLSFPSGHSSFTFFAMVYLA 283
            ||:.||:|..:       .||.. .||:.|.|:|..:.:   .|.||||.||||||:.:.||:||
 Frog   130 HFLDVCKPNWS-------KINCSLGYIETFVCEGDPTKS---SEARLSFYSGHSSFSMYCMVFLA 184

  Fly   284 LYLQARMTWRGSKLLRHLLQFLFIMVAWYTALSRVSDYKHHWSDVLAGSLIGSISALVVANYVSD 348
            ||||:|:....::|||..:||..|.|:.|..|||||||||||||||.|.:.|::..:::..||||
 Frog   185 LYLQSRLRADWARLLRPTIQFALIAVSVYVGLSRVSDYKHHWSDVLTGLIQGAVVGVLIVVYVSD 249

  Fly   349 LFQK 352
            .|::
 Frog   250 FFKE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wunNP_724787.1 PAP2_wunen 188..343 CDD:239479 78/155 (50%)
plpp1XP_012816123.1 PAP2_wunen 99..237 CDD:239479 77/147 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1354951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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