DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and AT5G19680

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_197469.1 Gene:AT5G19680 / 832088 AraportID:AT5G19680 Length:328 Species:Arabidopsis thaliana


Alignment Length:207 Identity:58/207 - (28%)
Similarity:99/207 - (47%) Gaps:41/207 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKA-TTIKE------ALKRWEEREQQNSLTAKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTN 58
            :||| :|:||      .:.:..|.|..::|  ::::|...  .:..|:: |....:.|.:.:..|
plant   127 ISKASSTLKELYVSKNEVNKIMEIEHLHNL--QILELGSN--RLRVMEN-LENFTKLEELWLGRN 186

  Fly    59 MIEKIFGLSGMKCLKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYIS 123
            .| |:..|.|:||:|.:||..|.:..:.|.|... .||||:||:|.|.|::||:.|..|:||.:|
plant   187 RI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECV-ALEELYLSHNGISKMEGLSALVNLRVLDVS 249

  Fly   124 NNLIKDWSEFNRLA----------EIESLEDL--VVVG------------NPLSEGLDEPTWRAE 164
            ||.:....:...|.          :|||||.:  .|.|            ||.::..|   :.|.
plant   250 NNKLTSVDDIQNLTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENNPCAKSSD---YVAA 311

  Fly   165 CIKRLPTIRKLD 176
            ..:..|.:.::|
plant   312 VRQIFPNVEQID 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 48/164 (29%)
leucine-rich repeat 50..71 CDD:275380 6/20 (30%)
leucine-rich repeat 95..116 CDD:275380 12/20 (60%)
leucine-rich repeat 117..141 CDD:275380 8/33 (24%)
AT5G19680NP_197469.1 leucine-rich repeat 19..38 CDD:275380
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..88 CDD:275380
leucine-rich repeat 89..110 CDD:275380
leucine-rich repeat 111..133 CDD:275380 3/5 (60%)
PPP1R42 121..308 CDD:455733 55/190 (29%)
leucine-rich repeat 134..155 CDD:275380 4/20 (20%)
leucine-rich repeat 156..177 CDD:275380 4/25 (16%)
leucine-rich repeat 178..198 CDD:275380 6/20 (30%)
leucine-rich repeat 199..220 CDD:275380 6/21 (29%)
leucine-rich repeat 221..242 CDD:275380 12/20 (60%)
leucine-rich repeat 243..264 CDD:275380 7/20 (35%)
leucine-rich repeat 265..291 CDD:275380 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.

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