DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8800 and AT3G17920

DIOPT Version :9

Sequence 1:NP_610483.1 Gene:CG8800 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_188419.2 Gene:AT3G17920 / 819843 AraportID:AT3G17920 Length:1010 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8800NP_610483.1 PPP1R42 37..180 CDD:411060
leucine-rich repeat 50..71 CDD:275380
leucine-rich repeat 95..116 CDD:275380
leucine-rich repeat 117..141 CDD:275380
AT3G17920NP_188419.2 leucine-rich repeat 51..78 CDD:275380
leucine-rich repeat 79..112 CDD:275380
leucine-rich repeat 113..136 CDD:275378
LRR_RI <189..297 CDD:238064
leucine-rich repeat 193..214 CDD:275378
leucine-rich repeat 215..237 CDD:275378
LRR_8 237..295 CDD:290566
leucine-rich repeat 238..259 CDD:275378
leucine-rich repeat 260..284 CDD:275378
leucine-rich repeat 285..297 CDD:275378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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