DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and drc3

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001071195.4 Gene:drc3 / 777619 ZFINID:ZDB-GENE-061103-349 Length:515 Species:Danio rerio


Alignment Length:180 Identity:53/180 - (29%)
Similarity:84/180 - (46%) Gaps:11/180 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KATTIKEALKRWEEREQQNSLT------AKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIE 61
            |...|.|.:.:....|||...|      .::::|:..:..|.|: ..|.:.....::.:..|.||
Zfish     8 KPGVIDEQMLQRAVEEQQTRNTEGIPELEELLELRLDYRNILKI-YHLWSFSSLTKLQLDNNAIE 71

  Fly    62 KIFGLSGMKCLKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNL 126
            :|.||..:..|..|.||.|.|:.|.||:.:.: |::|.|..|.|..|:.|..|:.|:||.:.||.
Zfish    72 RIEGLENLTNLTWLDLSFNKIEVIEGLQTLVK-LQDLSLFNNRISVIENLDTLQRLQVLSLGNNS 135

  Fly   127 IKDWSEFNRLAEIESLEDLVVVGNPLSEGLDEPTWRAECIKRLPTIRKLD 176
            |........|...:||..|.:.|||:.|   |..::......||.:..||
Zfish   136 IAQLENVIYLRRFQSLRTLNLAGNPICE---EDRYKTFVSAYLPELVYLD 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 45/140 (32%)
leucine-rich repeat 50..71 CDD:275380 6/20 (30%)
leucine-rich repeat 95..116 CDD:275380 8/20 (40%)
leucine-rich repeat 117..141 CDD:275380 7/23 (30%)
drc3NP_001071195.4 None

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