DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8800 and Lrriq3

DIOPT Version :9

Sequence 1:NP_610483.1 Gene:CG8800 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_083214.2 Gene:Lrriq3 / 74435 MGIID:1921685 Length:633 Species:Mus musculus


Alignment Length:190 Identity:43/190 - (22%)
Similarity:73/190 - (38%) Gaps:37/190 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKATTIKEALKRWEE---REQQNSLTAKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIEK 62
            ::|..|..|....:.|   .:|::.:..|...|.     ::.|:: |.|.:.......|.|.:..
Mouse     6 ITKELTSHEEWSHYNENIIEDQKDFVFVKYSGLH-----LKSMEN-LQTCISLRVCIFSNNFLTD 64

  Fly    63 IFGLSGMKCLKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNLI 127
            |..|...|.|..|.|..|.||.:..        :..|            :|||.||:||:.:|..
Mouse    65 IQPLQSCKKLIKLDLHGNQIKTLPD--------KNFW------------SGLKNLKLLYLHDNGF 109

  Fly   128 KDWSEFNRLAEIESLEDLVVVGNPLS--EGLDEPTWRAECIKRLPTIRKLDGEPVVLNEE 185
            ........|:...||..|.:...|:|  :|     :|...:..:..::.|| ..|:.:||
Mouse   110 SKLKNICVLSGCVSLIGLTMFDCPVSLKKG-----YRHVLVNSIWPLKALD-HHVISDEE 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8800NP_610483.1 PPP1R42 37..180 CDD:411060 33/144 (23%)
leucine-rich repeat 50..71 CDD:275380 4/20 (20%)
leucine-rich repeat 95..116 CDD:275380 3/20 (15%)
leucine-rich repeat 117..141 CDD:275380 6/23 (26%)
Lrriq3NP_083214.2 LRR_8 51..109 CDD:338972 20/77 (26%)
LRR 1 51..72 4/20 (20%)
leucine-rich repeat 52..73 CDD:275378 4/20 (20%)
LRR 2 73..94 7/40 (18%)
leucine-rich repeat 74..98 CDD:275378 9/43 (21%)
LRR 3 98..119 5/20 (25%)
leucine-rich repeat 99..112 CDD:275378 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..343
SidE <459..630 CDD:289056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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