DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and Lrriq3

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_083214.2 Gene:Lrriq3 / 74435 MGIID:1921685 Length:633 Species:Mus musculus


Alignment Length:190 Identity:43/190 - (22%)
Similarity:73/190 - (38%) Gaps:37/190 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKATTIKEALKRWEE---REQQNSLTAKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIEK 62
            ::|..|..|....:.|   .:|::.:..|...|.     ::.|:: |.|.:.......|.|.:..
Mouse     6 ITKELTSHEEWSHYNENIIEDQKDFVFVKYSGLH-----LKSMEN-LQTCISLRVCIFSNNFLTD 64

  Fly    63 IFGLSGMKCLKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNLI 127
            |..|...|.|..|.|..|.||.:..        :..|            :|||.||:||:.:|..
Mouse    65 IQPLQSCKKLIKLDLHGNQIKTLPD--------KNFW------------SGLKNLKLLYLHDNGF 109

  Fly   128 KDWSEFNRLAEIESLEDLVVVGNPLS--EGLDEPTWRAECIKRLPTIRKLDGEPVVLNEE 185
            ........|:...||..|.:...|:|  :|     :|...:..:..::.|| ..|:.:||
Mouse   110 SKLKNICVLSGCVSLIGLTMFDCPVSLKKG-----YRHVLVNSIWPLKALD-HHVISDEE 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 33/144 (23%)
leucine-rich repeat 50..71 CDD:275380 4/20 (20%)
leucine-rich repeat 95..116 CDD:275380 3/20 (15%)
leucine-rich repeat 117..141 CDD:275380 6/23 (26%)
Lrriq3NP_083214.2 LRR <4..>124 CDD:443914 31/143 (22%)
LRR 1 51..72 4/20 (20%)
leucine-rich repeat 52..73 CDD:275378 4/20 (20%)
LRR 2 73..94 7/40 (18%)
leucine-rich repeat 74..98 CDD:275378 9/43 (21%)
LRR 3 98..119 5/20 (25%)
leucine-rich repeat 99..112 CDD:275378 5/12 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 324..343
Blue background indicates that the domain is not in the aligned region.

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