DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and Dnal1

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_006240414.1 Gene:Dnal1 / 685664 RGDID:1591349 Length:249 Species:Rattus norvegicus


Alignment Length:187 Identity:109/187 - (58%)
Similarity:140/187 - (74%) Gaps:1/187 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKATTIKEALKRWEEREQQNSLTAKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIEKIFGL 66
            :|||||||||.||||:..|....|:.|.|..|.|||||||::|.||..||::|:|||.||||..|
  Rat    61 AKATTIKEALSRWEEKTGQKPSDAREIKLYAQIPPIEKMDASLSTLANCEKLSLSTNCIEKIANL 125

  Fly    67 SGMKCLKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNLIKDWS 131
            :|:|.|::|||.||.||.::|||||.:||||||:|||.|||:||:..::.||:|||||||:|||:
  Rat   126 NGLKNLRILSLGRNNIKNLNGLEAVGDTLEELWISYNFIEKLKGIHVMRKLKILYISNNLVKDWA 190

  Fly   132 EFNRLAEIESLEDLVVVGNPLSEGLD-EPTWRAECIKRLPTIRKLDGEPVVLNEEPQ 187
            ||.:|||:..|||||.|||||.|... |..|..|..||:|.::||||.||:..:|.:
  Rat   191 EFVKLAELPCLEDLVFVGNPLEEKHSAEGNWIEEATKRVPKLKKLDGTPVIKEDEEE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 86/143 (60%)
leucine-rich repeat 50..71 CDD:275380 12/20 (60%)
leucine-rich repeat 95..116 CDD:275380 13/20 (65%)
leucine-rich repeat 117..141 CDD:275380 17/23 (74%)
Dnal1XP_006240414.1 PPP1R42 96..240 CDD:455733 86/143 (60%)
leucine-rich repeat 109..129 CDD:275378 12/19 (63%)
leucine-rich repeat 131..175 CDD:275382 27/43 (63%)
leucine-rich repeat 176..199 CDD:275382 17/22 (77%)
leucine-rich repeat 201..231 CDD:275382 16/29 (55%)

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