DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8800 and LRRC61

DIOPT Version :9

Sequence 1:NP_610483.1 Gene:CG8800 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001136400.1 Gene:LRRC61 / 65999 HGNCID:21704 Length:259 Species:Homo sapiens


Alignment Length:146 Identity:40/146 - (27%)
Similarity:71/146 - (48%) Gaps:33/146 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LGTLVQC---ERISMSTNMIEKIFGLSGMKCLKVLSLSRNYIKQISGLE--AVAETLEELWLSYN 103
            ||.|.:|   |.:.:|.|.:..:..|:.::.|.||::|.|   :::|||  |..|.|:.|..:.|
Human    46 LGCLGECLGLEWLDLSGNALTHLGPLASLRQLAVLNVSNN---RLTGLEPLATCENLQSLNAAGN 107

  Fly   104 LIE---KIKGLTGLKCLKVLYISNNLIKDWSEFNRLAEIESLEDLVVVGNPLSEGLDEPTWRAEC 165
            |:.   :::.|.||.||:.|.:.:.|.:                   :.|||..   .|::.|..
Human   108 LLATPGQLQCLAGLPCLEYLRLRDPLAR-------------------LSNPLCA---NPSYWAAV 150

  Fly   166 IKRLPTIRKLDGEPVV 181
            .:.||.::.:|||.|:
Human   151 RELLPGLKVIDGERVI 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8800NP_610483.1 PPP1R42 37..180 CDD:411060 39/143 (27%)
leucine-rich repeat 50..71 CDD:275380 5/23 (22%)
leucine-rich repeat 95..116 CDD:275380 7/23 (30%)
leucine-rich repeat 117..141 CDD:275380 3/23 (13%)
LRRC61NP_001136400.1 LRR 1 32..53 3/6 (50%)
LRR 2 54..75 4/20 (20%)
leucine-rich repeat 55..76 CDD:275380 4/20 (20%)
LRR_9 <58..165 CDD:317038 34/131 (26%)
LRR 3 76..97 9/23 (39%)
leucine-rich repeat 77..98 CDD:275380 9/23 (39%)
LRR 4 98..119 4/20 (20%)
leucine-rich repeat 99..123 CDD:275380 7/23 (30%)
leucine-rich repeat 124..149 CDD:275380 7/46 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15454
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.000

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