DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8800 and lrrc23

DIOPT Version :9

Sequence 1:NP_610483.1 Gene:CG8800 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_012822059.1 Gene:lrrc23 / 549279 XenbaseID:XB-GENE-877189 Length:354 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8800NP_610483.1 PPP1R42 37..180 CDD:411060
leucine-rich repeat 50..71 CDD:275380
leucine-rich repeat 95..116 CDD:275380
leucine-rich repeat 117..141 CDD:275380
lrrc23XP_012822059.1 internalin_A <98..>291 CDD:380193
leucine-rich repeat 111..132 CDD:275380
leucine-rich repeat 133..154 CDD:275380
leucine-rich repeat 155..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
leucine-rich repeat 200..220 CDD:275380
leucine-rich repeat 221..242 CDD:275380
leucine-rich repeat 243..265 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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