DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG8800 and tilB

DIOPT Version :9

Sequence 1:	NP_610483.1	Gene:	CG8800 / 35962	FlyBaseID:	FBgn0033408	Length:	188	Species:	Drosophila melanogaster
Sequence 2:	NP_608460.1	Gene:	tilB / 33130	FlyBaseID:	FBgn0014395	Length:	395	Species:	Drosophila melanogaster

Alignment Length:	140	Identity:	43/140 - (30%)
Similarity:	72/140 - (51%)	Gaps:	11/140 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    38 EKMDSTLGTLVQCERISMSTNMIEKIFGLSG-MKCLKVLSLSRNYIKQISGLEAVAETLEELWLS 101
            |::.|||      |.||:....||.|..:.. .:.||:|.|..|.|.::..|..: :.||.|.::
  Fly    17 ERLISTL------EEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARLENLHKL-KRLEYLNVA 74

  Fly   102 YNLIEKIKGLTGLKCLKVLYISNNLIKDWSEFNRLAEIESLEDLVVVGNPLSEGLDEPTWRAECI 166
            .|.||:::.|.|.:.|..|.::.|.|::.:....|....:|.:||::|||.   :|.|.:|...:
  Fly    75 INNIERVENLEGCESLSKLDLTLNFIRELTSVESLCGNYNLRELVLIGNPC---VDYPHYRDYVV 136

  Fly   167 KRLPTIRKLD 176
            ..||.:..||
  Fly   137 ATLPQLNSLD 146

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG8800	NP_610483.1	PPP1R42	37..180	CDD:411060	43/140 (31%)
		leucine-rich repeat	50..71	CDD:275380	6/21 (29%)
		leucine-rich repeat	95..116	CDD:275380	8/20 (40%)
		leucine-rich repeat	117..141	CDD:275380	5/23 (22%)
tilB	NP_608460.1	LRR_9	1..174	CDD:258718	43/140 (31%)
		leucine-rich repeat	23..45	CDD:275378	7/27 (26%)
		LRR_4	46..86	CDD:289563	14/40 (35%)
		leucine-rich repeat	46..67	CDD:275378	7/21 (33%)
		leucine-rich repeat	68..89	CDD:275378	8/20 (40%)
		leucine-rich repeat	90..114	CDD:275378	5/23 (22%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0531
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810