DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and Lrriq1

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_063120486.1 Gene:Lrriq1 / 299759 RGDID:1564903 Length:1396 Species:Rattus norvegicus


Alignment Length:248 Identity:54/248 - (21%)
Similarity:86/248 - (34%) Gaps:112/248 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IEKMDSTLGTLVQCERIS------MSTNMIEKIFGLSGMKCLKVLSLSRNYIKQISGLEAVA--- 92
            |:..::.:.| :.||.:.      ::.|::..|.|..|...:::|.||.|.|.:|||||::.   
  Rat   854 IDAQENHIET-ISCENLENLSVVLLNKNLLTSIHGFDGCTNIQILELSYNKITRISGLESLKYLQ 917

  Fly    93 --------------------------------------------------------------ETL 95
                                                                          ..|
  Rat   918 QLIVDHNQLISTKGLCEVPTIVYLDCSHNHLTDVDGIGNCGLLQIVKLQGNYLREPPSLRNHVLL 982

  Fly    96 EELWLSYNLIEKIKGLTG--LKCLKVLYI----------------------SNNLIKD------W 130
            .||.|..|.|..::||:.  |..|::|.|                      |||.:.|      |
  Rat   983 RELHLDDNSISSVEGLSSCWLPLLQILSISQNSLATIVPLFHFVSLEKLDVSNNCLSDLTNVMCW 1047

  Fly   131 SEFNRLAEIESLEDLVVVGNPLSEGLDEPTWRAECIKRLPTIRKLDGEPVVLN 183
              ||   ...||.:|.::|||:   |.|..||...::.||.:|.|:|:  :||
  Rat  1048 --FN---ACYSLGELCLIGNPV---LQEVNWRHSILQALPALRVLNGD--MLN 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 52/243 (21%)
leucine-rich repeat 50..71 CDD:275380 6/26 (23%)
leucine-rich repeat 95..116 CDD:275380 9/22 (41%)
leucine-rich repeat 117..141 CDD:275380 10/51 (20%)
Lrriq1XP_063120486.1 None

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